Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181390g00011 ATGGCAATTGTGCAAGAAATTCGAATTCCCACTCTGTCTGGTAGCTCAGAGGCACCACCTATCTTTGATGGAACTACCAGGTTGTACATCAGTTATTCTTGCCCTTTTGCACAGCGTGTATGGATCACCAGGAACCACAAGGGATTACAAGAAAAGATCAAATTAGTTCCCATTGATCTTCAGAACAAGCCTGCTTGGTACAAAGAGAAGGTCCATCCAGAAGGCAAGGTGCCATCTCTTGAACATGATGGCAAGATTTTGGTGGAGAGTATTGACTTGATCAAATACATAGATGCCAATTTCGAAGGACCATCTCTATATCCTAATGACCCTGCCAAGAAAGAATTTGGTGAGGAGTTAATTAAGTATGTTGATACTTTAACCAAAGAGACATTTGGTTCATTCAAAGCAGATCCTGTAACCCAAACAAGTGCTGCATATGATTACCTGGAGAATGCTCTTGGTAAATTTGAAGATGGTCCATTCTTCCTTGGTGAATTTAGCTTGGTGGACATTGCTTATATCACATTTGTTGAAAGGTTTCAACTTGTGTTATCTGAAATTTACAAGCATGACATCACTGCTGGAAGGCCTAAACTAGCTACATGGATTGAGGAGATAAACAAGAATAATGCTTATAAGCAGACAAAACCAGAAAATCCACAAGAGTTCGTTGACTTTGTCAAGAAGCGATTCTTGGGTCAGTAG 708 0.4011 MAIVQEIRIPTLSGSSEAPPIFDGTTRLYISYSCPFAQRVWITRNHKGLQEKIKLVPIDLQNKPAWYKEKVHPEGKVPSLEHDGKILVESIDLIKYIDANFEGPSLYPNDPAKKEFGEELIKYVDTLTKETFGSFKADPVTQTSAAYDYLENALGKFEDGPFFLGEFSLVDIAYITFVERFQLVLSEIYKHDITAGRPKLATWIEEINKNNAYKQTKPENPQEFVDFVKKRFLGQ 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181390g00011 235 SUPERFAMILY Thioredoxin-like 18 106 IPR036249 -
Stsc181390g00011 235 FunFam Lambda class glutathione S-transferase 103 235 - -
Stsc181390g00011 235 Pfam Glutathione S-transferase, N-terminal domain 28 104 IPR004045 -
Stsc181390g00011 235 SFLD Main (cytGST) 27 209 - -
Stsc181390g00011 235 Gene3D Glutaredoxin 1 102 - -
Stsc181390g00011 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 24 105 IPR004045 -
Stsc181390g00011 235 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 232 IPR044629 GO:0004364
Stsc181390g00011 235 SUPERFAMILY GST C-terminal domain-like 101 232 IPR036282 -
Stsc181390g00011 235 FunFam Glutathione S-transferase L2, chloroplastic 1 102 - -
Stsc181390g00011 235 Pfam Glutathione S-transferase, C-terminal domain 141 205 - -
Stsc181390g00011 235 Gene3D - 103 235 - -
Stsc181390g00011 235 SFLD Glutathione Transferase (cytosolic) 27 209 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181390g00011 Stsc-Chr181390 37787 39791 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181390g00011 3 233 Glutathione S-transferase Gene Family AT5G02790 66.234 3.97e-111 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181390g00011 K00799 - gmx:100793025 362.459