Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181390g00008 ATGGTTAGATCGTGTTGGAAACCAAGTGGAGATGGTGGTGATGATGATGTAAGAGGGAAAGTTGAAGGTTTGCTATGGTACAAGGATTTGGGGCACCATCTTTATGGTGAATTCTCAATGGCTGTGATCCAAGCCAATAGTTCATTGGAGGATCGAAGCCAACTTGAATCTGGACCTTTAAGTTCTGATTATATGGGTCCTCAAGGAACCTTTGTAGGTGTATATGATGGTCATGGTGGTGCTGAGGCTTCACAATTTGTCAGTGACAATCTTTTCAGAAATTTCAAGAGATTTGCAGCAGAACATCAAGGAATTTCAGAAAATGTTATCAAAAGGGCTTTTACTGAAACTGATGAGAGTTTTCTGACTGTTGTGAAGAAAAAGTGGCTAAGCAAGCCACAAATTGCCTCAGCGGGTTCATGTTGTTTGGCAGGGATCATCTGCAACGGCATGATGTATATTGCGAACGCCGGAGACTCGAGGGCGGTGTTAGGAAGATTAGAGAGGGCAACAAGGGAGACTTATGCTGTTCAAGTATCTGCAGAACACAACGTTAACATAGAGACAGAGAGAGATGNNNNNNNNNNAGTTAGGTCAAGGCACCCTTATGATTCACAAATTGTGGTCATGAAACACAATGTTTGGCGTGTGAAAGGCCTAATACAGGTTTCAAGGTCTTTAGGTGATGCGTATCTCAAGAGAGCTGAATTCAACAGGGAGCCTCTAGCACAGAAGTTTAGGTTGCCCGAACCCTTCTTCAAGCCGATTCTTAGTTGCGAGCCATCGATATCAACGCAAAAACTCCATCCCGATGATCAGTTTCTGATCCTTGCTTCTGATGGTCTATGGGAGCAGCTTAGCAACCAAGAAGCTGTCAACATAGTCAGCAGCAACCCACGAAATGGGATTGCAAGGAAGCTTGTAAAGGCTGCACTCCGCGAAGCAGCTAAGAAGAGAGAGATGAGATTCTCAGACCTACAAAAGATTGAAAAGGGGGTGAGGAGACACTTCCATGATGACATATCAGTGATTGTTGTGTTCCTCAATCCAAAACTGATTGATAATACCTCTCTGTGGGGTTCTCCTCTTTCGATCAAAGGCGGTGGGCCTGCTATCTCTTAG 1122 0.4394 MVRSCWKPSGDGGDDDVRGKVEGLLWYKDLGHHLYGEFSMAVIQANSSLEDRSQLESGPLSSDYMGPQGTFVGVYDGHGGAEASQFVSDNLFRNFKRFAAEHQGISENVIKRAFTETDESFLTVVKKKWLSKPQIASAGSCCLAGIICNGMMYIANAGDSRAVLGRLERATRETYAVQVSAEHNVNIETERDXXXXVRSRHPYDSQIVVMKHNVWRVKGLIQVSRSLGDAYLKRAEFNREPLAQKFRLPEPFFKPILSCEPSISTQKLHPDDQFLILASDGLWEQLSNQEAVNIVSSNPRNGIARKLVKAALREAAKKREMRFSDLQKIEKGVRRHFHDDISVIVVFLNPKLIDNTSLWGSPLSIKGGGPAIS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181390g00008 373 SUPERFAMILY PP2C-like 46 349 IPR036457 -
Stsc181390g00008 373 Pfam Protein phosphatase 2C 69 317 IPR001932 -
Stsc181390g00008 373 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Stsc181390g00008 373 Gene3D - 28 357 IPR036457 -
Stsc181390g00008 373 CDD PP2Cc 35 348 IPR001932 -
Stsc181390g00008 373 FunFam Phosphatase 2C family protein 26 358 - -
Stsc181390g00008 373 ProSiteProfiles PPM-type phosphatase domain profile. 34 348 IPR001932 -
Stsc181390g00008 373 SMART PP2C_4 29 346 IPR001932 -
Stsc181390g00008 373 PANTHER PROTEIN PHOSPHATASE 28 346 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181390g00008 Stsc-Chr181390 22749 25234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181390g00008 1 369 PP2C-type Phosphatase Gene Family AT3G12620 64.247 2.38e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181390g00008 K01102 - gmx:100815902 575.474