Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181387g00014 ATGAGGTTGAGGTGTGCCCTTCTTGAGTACTGCTTTGCAGGCACTACTTCTGATGCATTGACCGAGTTTCATATTAAGTCAAAGTTACCAAACTTAGGTTATACTGAGCTTGCAAGTGCCACTCATCATTTTCATCCATCCAAGAAAATTGGAACTATAGCCTATCACAAGGTATATCACGGGATACTGGAAGATTTTCGTGAAGTTGCAATCCAACGCCTAACGGCGAGTGAATTCCAAGAAATTGAAAAGCATGTAGAAGGCTGCAGGAGCAGAATCTTAAGTCTTTTGCCGCACAAAAATGTGGTGTCTGTGTACGGGTACGGTTCTAATGGGAAAGAATTCCTGCTAGCACATGAGTACGTTCCAAATGGCACTCTTCATAATCATCTTCATGGCCGAGGATCAAAGCGCCTCATGTTGCCATGGCATACTCGATTGGATATTGCTATTGACATTGCCAATGCGTTGGTATATCTTCACTCTAATGGAATTGTTCACAGCCAGGTAACATCCCACAATATTCTTCTAGACCAAAACTTTGGTGCAAAAGTTAAGAACTGTCTTGGATCATGGCAACTTGCCAGAGACCCTTCTGGTTTTGTTTCACATGATCTCGATTCGGTCCAAGGGAGAATAGGTTATGTGGATCCAGCATTATTAGGTGGTGACTTTTATCTTAACTTGAAGAATGACGTATATAGCTTTGGGGTGGTGTTGTGTGAGCTTTTATCATCCAAGCCGTCGTATTTGAGGTTGGACCCGGACGACAAGAGGGACATGGCTCTTGCTACTTTCACAATCAGTAAAATGGAAAACAATGCGTTGGAGGAGCTATTGGATCCAAGCCTTGGGTTTGAATCAGACCCTGCTATAAAAAAGATGCTAGCTTCTGTGGCAGTGCTAGCATATCAATGCTTGATTTATGACGTGTCTCTAAGGCCACCCATGGCACAGGTGCTTGAGGGTTTGAAGGGCATCAGAGAACAGAGAAGGGACTTAAATTTGACTGCAGATTTCGAGTGCCAAACTCTGACATTAACGTTTTTCCGGGATTACATGAAGTCACAATTCCAAATCTTCTCTTATGATCTCCTTGCAAAAGCAACTAACCATTTTGAGAATTATGTTGGGAAAGGAGGCTTTGGGACTGTTTACTATGGGAAGCTCCCACAAGGGTATGAAGTAGCAATCAAACGTTTCCATGAAAAGAAGGACAAAACAACAAAGCAATTCGCCAGAGAAATTGAGATCCTAAGTCTCATGCGCCACCAGAATCTCGTGTCACTTTATGGCCGCAGTTGTGATGACAGTGATGAGCTCCTGTTAGTTTATGAGTATGTCCCCAACGGCTCTCTATCAACCTATCTCCATCGAAATTCTGGAAACAAACTACCATGGGCTACCAGATTAAACATTGCCATTGAAACTGCTTCTGGACTAGCCTATCTTCACCATTCTGGTATAATTCACCGTGATGTGAAACCCAGCAACATTCTGTTGGACAAAAACTTTTGTGCCAAAGTTGCAGATTTCGGGCTAGCGCGGTTTCTTCCACTAGTTTCCCAGGAGGATCTTCATTTTGTTACTCATGTTTCTACTGCTCCAGTAGGGACCCCTGCTTATATGGATCCAGAGTACTTTGAATTCAATAAGGTCAGTGACAAAAGCGATGTATATAGCTATGGCATGGTTTTGTTTCAGCTGATATCATCCATGCCTTGCACTGTAAGGCAGGGGCCACAGCTTTTTACTTTGGCTAACTTTGCAATGGGAAAGATCTTGAACAATGAATTAGAAGAGCTTGTGGATCCAAGTCTTGGTTTTCACTCAGATAACAGTGTTATGAAAACTATAACTGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGCACCCTAAAGAATTCAGGCCATCAATGAAGCAGGTCTTAGAGACACTGGAGGGCATAAAGCAAGGTTCTTGGGGGTTCAACCAGATAACATAG 1986 0.4295 MRLRCALLEYCFAGTTSDALTEFHIKSKLPNLGYTELASATHHFHPSKKIGTIAYHKVYHGILEDFREVAIQRLTASEFQEIEKHVEGCRSRILSLLPHKNVVSVYGYGSNGKEFLLAHEYVPNGTLHNHLHGRGSKRLMLPWHTRLDIAIDIANALVYLHSNGIVHSQVTSHNILLDQNFGAKVKNCLGSWQLARDPSGFVSHDLDSVQGRIGYVDPALLGGDFYLNLKNDVYSFGVVLCELLSSKPSYLRLDPDDKRDMALATFTISKMENNALEELLDPSLGFESDPAIKKMLASVAVLAYQCLIYDVSLRPPMAQVLEGLKGIREQRRDLNLTADFECQTLTLTFFRDYMKSQFQIFSYDLLAKATNHFENYVGKGGFGTVYYGKLPQGYEVAIKRFHEKKDKTTKQFAREIEILSLMRHQNLVSLYGRSCDDSDELLLVYEYVPNGSLSTYLHRNSGNKLPWATRLNIAIETASGLAYLHHSGIIHRDVKPSNILLDKNFCAKVADFGLARFLPLVSQEDLHFVTHVSTAPVGTPAYMDPEYFEFNKVSDKSDVYSYGMVLFQLISSMPCTVRQGPQLFTLANFAMGKILNNELEELVDPSLGFHSDNSVMKTITAVAELAFQCVQHPKEFRPSMKQVLETLEGIKQGSWGFNQIT 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181387g00014 661 ProSiteProfiles Protein kinase domain profile. 44 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181387g00014 661 CDD STKc_IRAK 377 650 - -
Stsc181387g00014 661 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Stsc181387g00014 661 Pfam Protein tyrosine and serine/threonine kinase 373 647 IPR001245 GO:0004672|GO:0006468
Stsc181387g00014 661 Gene3D Transferase(Phosphotransferase) domain 1 122 338 - -
Stsc181387g00014 661 Gene3D Transferase(Phosphotransferase) domain 1 448 656 - -
Stsc181387g00014 661 SUPERFAMILY Protein kinase-like (PK-like) 354 648 IPR011009 -
Stsc181387g00014 661 ProSiteProfiles Protein kinase domain profile. 371 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181387g00014 661 Pfam Protein kinase domain 45 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181387g00014 661 Gene3D Phosphorylase Kinase; domain 1 349 447 - -
Stsc181387g00014 661 Gene3D Phosphorylase Kinase; domain 1 15 121 - -
Stsc181387g00014 661 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 448 657 - -
Stsc181387g00014 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Stsc181387g00014 661 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 357 653 IPR044652 GO:0004672
Stsc181387g00014 661 SMART serkin_6 371 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181387g00014 661 SMART serkin_6 44 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181387g00014 661 SUPERFAMILY Protein kinase-like (PK-like) 24 324 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181387g00014 Stsc-Chr181387 53303 55971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181387g00014 357 652 Receptor kinase-like Gene Family AT1G25390 51.656 4.36e-90 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Stsc181387g00014 Pkinase 1.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181387g00014 - - aip:107634816 1149.42