Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181384g00002 ATGTCAAGAGATGTAGCAGCAAAGGCATGGGGGAAACCAAATGTGTTTAGAAAAGACAGATACTCAATGTTTGGAGAGGGTTTGGTTATGGCTGAAAGTGATCAATGGGTTCTTCATCGCCATGTTATAGCTCCAGCATTTAACCCTCTTAAATTGAAGGGAATGGGGAACATGATGGTTGAGTCCACAAGAAAAATGATAGAAAGATGGAACTACCAAATAAATTATGGTAATAACCATGAAATTGATGTTGAGAGAGAGATTATGGAAACAGCTGGTGAGATCATAGCAAAATCAAGTTTTGGAATGGAAGATGATGAAAATGGGAAAATAGTTTTTAGAAAATTAAAAGAATTGCAAATGGTACTCTTTAAGAGCCACCGTTTTGTGGGGGTTCCCTTTGGCAAGTTTTTTGCTATCAAGAAAACCCTAGATGCAAAGAAAATTGGTCAAGAAATTGATAAGCTCTTGATCTCTATTATAAATGATAGGATGAAAAGGGGAAAATCTCAAGAAGATTTGTTGGGTCATTTGTTGCAAGAAAATAATAATGAAGAGGGAAAAAGGAAATTATTCTCAATGAGAGAATTGGTTGATGAGTGTAAGACCTTTTTCTTTGGTGGCTATGAAACTACATCACTTTCCATCACTTGGAGTTTGCTCCTTCTAGCCATGCATGAAGATTGGCAAAACCAATTGAGAGATGAAATCAAACAAGTCATGGGGAATGGAGATTTTGAAGTTGATCTCAACTTGCTTCATGGTTTGAAAAAGATGAAATGGGTGATGAATGAAGCTTTAAGACTCTATCCACCATCACCAAATGTGCAAAGGCAAGCCAAAGAGGACATTAGGGTTGACAATTTTACAGTGCCTAAAGGGACCAACATTTGGGTTGACCTTATAGCCATGCACCGCGACGCGGCGCTATGGGGAAGCGACGCGAATGGGTTCAAACCGGAGAGGTTCATGGAGGATGCCAACGGCGGATGCAACCATCAAATGGGGTACTTGCCATTTGGATTTGGAGGCAGAATGTGTGTTGGTAGGAACTTGTCATTGATGGAGTATAAGATTGTGTTAACCCTACTCCTATCTAGGTTTAGGTTTAAAGTTTCCCCTTCTTATCAACATTCTCCTGCTATCATGCTATCACTTAGGCCTACTCATGGACTTCCTCTTATTGTTCAACCTCTTTAG 1200 0.395 MSRDVAAKAWGKPNVFRKDRYSMFGEGLVMAESDQWVLHRHVIAPAFNPLKLKGMGNMMVESTRKMIERWNYQINYGNNHEIDVEREIMETAGEIIAKSSFGMEDDENGKIVFRKLKELQMVLFKSHRFVGVPFGKFFAIKKTLDAKKIGQEIDKLLISIINDRMKRGKSQEDLLGHLLQENNNEEGKRKLFSMRELVDECKTFFFGGYETTSLSITWSLLLLAMHEDWQNQLRDEIKQVMGNGDFEVDLNLLHGLKKMKWVMNEALRLYPPSPNVQRQAKEDIRVDNFTVPKGTNIWVDLIAMHRDAALWGSDANGFKPERFMEDANGGCNHQMGYLPFGFGGRMCVGRNLSLMEYKIVLTLLLSRFRFKVSPSYQHSPAIMLSLRPTHGLPLIVQPL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181384g00002 399 PRINTS E-class P450 group I signature 337 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00002 399 PRINTS E-class P450 group I signature 216 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00002 399 PRINTS E-class P450 group I signature 347 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00002 399 PRINTS E-class P450 group I signature 196 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00002 399 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 391 - -
Stsc181384g00002 399 Pfam Cytochrome P450 11 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00002 399 PRINTS P450 superfamily signature 261 272 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00002 399 PRINTS P450 superfamily signature 207 224 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00002 399 PRINTS P450 superfamily signature 338 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00002 399 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00002 399 SUPERFAMILY Cytochrome P450 12 398 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00002 399 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 340 349 IPR017972 GO:0005506|GO:0016705
Stsc181384g00002 399 Gene3D Cytochrome P450 2 397 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181384g00002 Stsc-Chr181384 20469 23195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181384g00002 1 399 Cytochrome P450 AT5G52400 58.065 1.24e-170 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181384g00002 - - gmx:100802882 577.4