Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181384g00001 ATGCATGATATACACGCCACCGTGTTCCCCTACTTTTCAAGGTGGCAAAGTTCTCATGGGAAAATCTTTATCTATTGGCTGGGCACAGAACCATTTTTGTACATCGCAGACCCTGAGTTCTTGAAGAAAATGTCCACAGAAGTTTTAGCCAAAAAATGGGGAAAACCAAATGTTTTTAGAAATGATAGAAACCCCATGTTTGGGAATGGTTTAATCATGGTTGAAGGAAATGAATGGGTTCATCACCGCCATGTTGTGGCCCCTTCATTCTCTCCCCTTAACTTGAAGGCAATGGGAAGCATGATAAAGGAGTGCACAGAGCAAATGATGGAGAGATGGCTTACCCAAATTAACTCCGGCAACAGCGAAATCGATGTCGAGAAGGAGATCATAGCCACAGCAGGAGAGATCATAGCAACAAGCAGCTTTGGCATGAAAGATGAAAAAGCAAGGGAAATATGTGAAAAGCTAAGAGAATTACAAATGATACTTTTCAAGACAACAAGATATGTTGGTGTGCCATTTGGCAAATGGTTCAACACAAAGAAAACCCTAGAAGCAAGAAAACTTGGGAAGGAGATTGACAAGCTCTTGTTAAATGTCATAACTAACCGCAAGAATAATTCAAACAACAAAGAAAAGGGTCAAGAAGATTTGCTAGGGTTGTTGCTTGAAGCTAATAGAAAAGTTGATGGGAAATTTGGTAAGACATTAAGCACAAGAGAACTTGTGGATGAGTGCAAGACTTTCTTCTTTGCTGGCCATGAGACAACGGCATTGGCTATTTCTTGGACTTTGTTTTTATTGGCTGTTCATGAAGATTGGCAAATCCAATTAAGAGATGAGATAAGAGAATTGGCGGGTGATAACAAAGAGATTGATATCAATGTTCTTTCTGGCTTGAAAAAGATGAAGTGGGTAATGAATGAAGCTGTGAGGCTTTATCCACCAGCACCAAATGTTCAAAGGCAAGCTAAAGAGGACATTAAAGTTGATAACAATTTTACAGTGCCAAGTGGGACAAACATATGGATTGATGTTGTGGGTATGCATCATGATCCAACACTATGGGGAGATGATGTGAATGAGTTCAGGCCAGAGAGGTTCATAGATGATGTCAATGGTGGATGCAATCACAAGATGGGTTACTTGCCATTTGGATTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGTCTTTCATGGAGTATAAGATTGTGTTAACCCTACTTCTCTCTAGGTTTAGGTTTAAACTCTCACCAAGTTATCAACATTCTCCTGCTATCATGTTATCACTTAGGCCTACTCATGGACTTCCTCTCATAGTTGAAACCCTTTAA 1338 0.4006 MHDIHATVFPYFSRWQSSHGKIFIYWLGTEPFLYIADPEFLKKMSTEVLAKKWGKPNVFRNDRNPMFGNGLIMVEGNEWVHHRHVVAPSFSPLNLKAMGSMIKECTEQMMERWLTQINSGNSEIDVEKEIIATAGEIIATSSFGMKDEKAREICEKLRELQMILFKTTRYVGVPFGKWFNTKKTLEARKLGKEIDKLLLNVITNRKNNSNNKEKGQEDLLGLLLEANRKVDGKFGKTLSTRELVDECKTFFFAGHETTALAISWTLFLLAVHEDWQIQLRDEIRELAGDNKEIDINVLSGLKKMKWVMNEAVRLYPPAPNVQRQAKEDIKVDNNFTVPSGTNIWIDVVGMHHDPTLWGDDVNEFRPERFIDDVNGGCNHKMGYLPFGFGGRMCVGRNLSFMEYKIVLTLLLSRFRFKLSPSYQHSPAIMLSLRPTHGLPLIVETL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181384g00001 445 Gene3D Cytochrome P450 1 444 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00001 445 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 437 - -
Stsc181384g00001 445 Pfam Cytochrome P450 9 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00001 445 PRINTS E-class P450 group I signature 347 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00001 445 PRINTS E-class P450 group I signature 16 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00001 445 PRINTS E-class P450 group I signature 242 259 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00001 445 PRINTS E-class P450 group I signature 383 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00001 445 PRINTS E-class P450 group I signature 393 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00001 445 PRINTS E-class P450 group I signature 262 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00001 445 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00001 445 PRINTS P450 superfamily signature 306 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00001 445 PRINTS P450 superfamily signature 253 270 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00001 445 PRINTS P450 superfamily signature 384 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181384g00001 445 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 386 395 IPR017972 GO:0005506|GO:0016705
Stsc181384g00001 445 SUPERFAMILY Cytochrome P450 5 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181384g00001 Stsc-Chr181384 12324 17225 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181384g00001 2 445 Cytochrome P450 AT5G52400 60.360 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181384g00001 - - gmx:100784128 723.776