Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181383g00006 ATGTCTATACCTGGGTCTCAAACTGCCCCTTCTCCGCTTCCAATGGGTGCACAAATACCAGGGTCTTTCATGCAAGACACAAATAACTTGTCCCAGCTGTCCAAAAAACCTAGGCTGGATATCAAGCAGGAGGATTTAATGCAGCAGCAGGTTATACAACAACTTCTTCAACGACAGGACCCCATGCAATACCAGGGTCGTAATCCACAGATACAGGCTTTGATTCAGCAGCAGCAAAGACTGAGGCAACAACATATCCTTCAGTCAATGCCACAGTTACAGCGAGCACACTTGCAGCAACAACAGCAGCAGCAGCAACAACAACAACAACAGATGCATTTGAGGCAGCAGCAATTACAGCAACAATCGATGCAACCCATATCTGCAGTAAAGCGCCCATATGACAGTAGCGTTAATGGTGTATGTGCTCGTAGATTGATGCAATACCTCTATCATCAAAGGCAACGACCAAGCGAAAACACTATTGCCTATTGGAGAAAATTTGTGGCTGAGTATTACTCTCCTCGAGCAAAGGAACGGTGGTGCTTGTCTTTGTATAATAATGTTGGGCATCATGCACTCGGCGTTTTCCCTCAGGCATCTATGGATGCATGGCAGTGCGACATATGTGGTTCTAAATCTGGAAGGGGCTTTGAGGCAACTTTTGAAGTCCTCCCTAGACTTAATGACATCAAATTTGGCAGTGGAGTGATTGATGAACTTCTGTTTTTGGAATTGCCACGCGAACAAAGATTTCCTTCTGGTTTGATGATGTTAGAATATGCAAAAGCAGTTCAAGAGAGCGTATACGAGCAACTTCGTGTTGTTCGTGAGGGTCACCTACGTATTATATTTACGCAAGATCTTAAGATATTATCTTGGGAGTTCTGTGCAAGGCGCCATGAAGAACTTCTTCCTAGAAGGTTGGTTGCACCACAGGTAAACCAGTTGGTTCAAGTAGCTCAAAAATGTCAGAGTACAATTGCTGAAAGTGGTTCAGATGGGGTTTCTCAGCAAGATTTGCAAGCAAACAGCAATATGGTATTGGCTGCTGGGCGTCAACTTGCAAAAAGTCTGGAGTTGCAGTCGTTGAATGACTTAGGTTTTTCCAAAAGATATATATCTGAGGTTGTCAATTCCATGAAAGATCTGATAGATATCTGTCGGGAGCACAAAATTGGGGCAATTGAGAGCTTGAAAAATTACCCTCGTTTTGCAACTGCCGCTAAGCTCCAGATGCAAAAAATGCATGAGATGGAACAGCTAGCAAATGTTCAAGGTCTGCCAACTGATCGAAACACAATTAACAAACTAATGGCAATGAATCCTAGTTTGAACAACCCAATTAATAGTAATAATCATAATATGATAAATCGTGGTGCTTTGAGTGGGTCAGCACAAGCTGCTATGGCACTGTCTAACTACCAGAATATTCTCATGAGGCAAAACTCGATGAATTCAAGCCCTGGCTCAATTCAGCGAGAAGGATCATCATCTTTCAATAATGCAAACCAGAGTCCTTCTTCAGCTATGCAAGGTGCTGCCTCTGCTTTTATTCCAGGCTCAATGCAGAATTTACCCGTCAGTGGTTTCCCAAGTCCCCATCTACCCCCTCAGCAGCAACAGCAACAGCACCTTCAACAGCGATCATTAAGTGCAAATAGCTTCATGCAACAAAACCATTCACAGGGATCCCAAGGAAGCCAAGCTCTACAGCAGCAGATGATCCAGCAACTGCTTATGTCTAATAACAATGGGGGAGTACAATCACAATCTCTTAGTGGACCCAATGCAAATGGGAGCATAGCAAAGAATGGGATGGGTTTCGGAGGTCATTCTCCGTCTCCTTCTATAACTGGAGGATCTGTCAATGTTTCAGGTAACAAAGGCCCGGTTTCAAGGAGTAATAGCTTCAAATCGGCCTCAAACAGTGATTCTTCTCCGGCGGGTGGCAACAATGGATTCAACCAGAGGGCATCAGATATGCCACAGAATCTCCATTTGCAAGATGTGGTTCCGGATATTGGCAGTGATTTTACAGATAGCCCCTTCTTCAGTAGTGATCTGGATGATAACATGGGTTTTGGCTGGAAGGCATGA 2100 0.441 MSIPGSQTAPSPLPMGAQIPGSFMQDTNNLSQLSKKPRLDIKQEDLMQQQVIQQLLQRQDPMQYQGRNPQIQALIQQQQRLRQQHILQSMPQLQRAHLQQQQQQQQQQQQQMHLRQQQLQQQSMQPISAVKRPYDSSVNGVCARRLMQYLYHQRQRPSENTIAYWRKFVAEYYSPRAKERWCLSLYNNVGHHALGVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLNDIKFGSGVIDELLFLELPREQRFPSGLMMLEYAKAVQESVYEQLRVVREGHLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGSDGVSQQDLQANSNMVLAAGRQLAKSLELQSLNDLGFSKRYISEVVNSMKDLIDICREHKIGAIESLKNYPRFATAAKLQMQKMHEMEQLANVQGLPTDRNTINKLMAMNPSLNNPINSNNHNMINRGALSGSAQAAMALSNYQNILMRQNSMNSSPGSIQREGSSSFNNANQSPSSAMQGAASAFIPGSMQNLPVSGFPSPHLPPQQQQQQHLQQRSLSANSFMQQNHSQGSQGSQALQQQMIQQLLMSNNNGGVQSQSLSGPNANGSIAKNGMGFGGHSPSPSITGGSVNVSGNKGPVSRSNSFKSASNSDSSPAGGNNGFNQRASDMPQNLHLQDVVPDIGSDFTDSPFFSSDLDDNMGFGWKA 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181383g00006 699 MobiDBLite consensus disorder prediction 584 669 - -
Stsc181383g00006 699 PANTHER LIM DOMAIN-BINDING PROTEIN 21 681 IPR029005 -
Stsc181383g00006 699 Pfam LIM-domain binding protein 145 400 IPR029005 -
Stsc181383g00006 699 MobiDBLite consensus disorder prediction 615 664 - -
Stsc181383g00006 699 MobiDBLite consensus disorder prediction 483 550 - -
Stsc181383g00006 699 Coils Coil 98 118 - -
Stsc181383g00006 699 MobiDBLite consensus disorder prediction 1 28 - -
Stsc181383g00006 699 MobiDBLite consensus disorder prediction 98 118 - -
Stsc181383g00006 699 MobiDBLite consensus disorder prediction 584 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181383g00006 Stsc-Chr181383 70962 75004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181383g00006 126 404 C2H2 Transcription Factor Family AT1G43850 56.690 4.60e-102 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181383g00006 - - gmx:100816886 983.786