Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181383g00002 ATGGCTCATCAACCTCAACCACCGCCACCACCACCACCATCACCACCTCCACCACCTCCACTACCTCCACCTCGGCCACCACAACGTAGAGCTTGCTGGGCATGCGCCAAACACAGAAAACGCTGTCAACCTGATTGCATATTTGCTCGCTATTTCCTCCATGACCCTGATACCTTGGCTAACATTTATAAGCTTTTCGGTCTTGAAAATGCAAGAAAACTCCTTATGAAAGTTAGAGCTGAGGAGCAACAAGAAACAGCAATAACTTTGGGTGTTGAAGCTAATATGTGGAAACAATTCCCTGTTGCTGGTCCTGTTGGGGTTATCCATGGTTATGAAACCTTAATCCAGGAAAGTGAGATTGAACTTGCCACTATAAATGCTTTCATTCAGCAATGCAAGATGGCACAATGTTCAACTTCATCTGCTGACCAAAATGATGAAAATGCACAGAATCAAACAATATCTTCATCAGTTGATGCCATGCCGATTCCCCCTAATGATGGCAATTCTTAA 516 0.4419 MAHQPQPPPPPPPSPPPPPPLPPPRPPQRRACWACAKHRKRCQPDCIFARYFLHDPDTLANIYKLFGLENARKLLMKVRAEEQQETAITLGVEANMWKQFPVAGPVGVIHGYETLIQESEIELATINAFIQQCKMAQCSTSSADQNDENAQNQTISSSVDAMPIPPNDGNS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181383g00002 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 30 152 - -
Stsc181383g00002 171 MobiDBLite consensus disorder prediction 1 28 - -
Stsc181383g00002 171 ProSiteProfiles LOB domain profile. 30 130 IPR004883 -
Stsc181383g00002 171 MobiDBLite consensus disorder prediction 142 171 - -
Stsc181383g00002 171 Pfam Lateral organ boundaries (LOB) domain 31 126 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181383g00002 Stsc-Chr181383 12792 13518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181383g00002 32 149 AS2 family AT2G30340 33.613 7.63e-17 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc181383g00002 LOB 8.2e-21 No_clan