Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181381g00015 ATGGGTTGTGCAAATTTGGCATTGCATTTGCATATTCTCATCATGACAGTGATGGTTTTTACAGCTACTTTCTGTGTTGGGGACACTGACCCCCTTGACGTTGCAGCAATCAATAGCTTATATGTAGCTCTAGGATCACCACCCCTTCAAGGGTGGAAACCTTCAGGAGGAGATCCATGTGTGGAACAGTGGCAAGGTGTCAGCTGTGTCTTCTCCAACATAACTGCTTTACATCTTGGAGGCATGAATTTGAGTGGAGAGCTGGGAAGTAATTTGGATTTTCCATCCATCATAGAAATGGACATTAGCAACAACAGCATTGGAGGGACCATTCCATCCACTCTGCCCTCTACTCTCAAGAGATTGTCTCTTTCGGATAATAAGTTAAATGGAAGTATTCCAGATGCCTTATCCATATTAACTCAACTAACAGAATTGTCATTAGGCAGTAACCATCTAACTGGACAAATACCAGATGTGTTTCTGCAGTTCACCAGTTTGACAAATATGAATCTGTCAGGTAACAACTTGAGTGGTCAGCTACCTCCTTCGATTGCGAATTTATCATCTCTTACTGCATTACACTTGCAGAACAATCAACTTGGTGGAACCCTTTTTGTTTTGGAGGACCTCCCTCTTCAGAATCTGAATATAGAGCACAATCTATTCTCTGGGCCAATTCCTCCAAAGTTGTTGACTATTCCTGAGTTCAGAAAAGATGGGAATCCCTTCAATACTACTGTTATTCCTTCACCTCCAGCTGCAGCTCCTTCACCTGAAGCCATGGTTCCTTCTCCTTCTCCTTCCAATGAAAAGTCACCTCATAGCGTGGCAAAAAGCCCTTCAATGTCCATGAAAGCTCCAGCACCTTCGATTACTAGGAGTTCCTTCGAAGTTAAGAACATAATTTGGTGGATTGCTGGTTTCGGGATCTTCATATTTATTGCATTAGGAATTTCTCTTTTTATGTGTTGCTACTGTAAGAGAAGACCAAGGAGCAAGAATTATGAGGAACACACAGACATGGGTGTTTATATTGATGTGGAGAAAGGACATGGCTCAAAACTTCCACCACTTCAGCAAGCACCACCACATCCTCTCCCAATAATTCCTGGAGAAAAGTTCATCAGTCCACCTAAATCCGCCAATGAAATCGAAGGTGGAAAGCAAATTATGACTAGTTCCATCAGGGTTTATTCTGTTGCATCGCTTCAGCAGTATACCAATAGTTTTTCGCAAGAAAATTATATCGGAGAAGGGACACTTGGCCCTGTTTATAAGGGTGAGCTCCCTGATGGAAAGTTACTGGCTGTGAGGAAGCTGAATACTTCCATGGTCCAGAATCATGAGCAGTTTCTTCAATTAGTATCCAATATCTCCAAAATTCAACATGCTAACATTGTAAAACTCATAGGCTACTGCTCCGAGCATAGCCAACAACTACTCGTGTATGATTATTGCAGCAATGGAACCCTTCATGATGCATTACATACTGATGATAGAGCTCGTGTTAAACTTTCATGGAACGAACGAATCCAGGTGTCGCTCGGAGCTGCTAGAGCTTTACAGTATCTGCATGAGAACTTTCAGCCACCTATTGTGCACCGAAATTTTCGATCTTCTAATGTTCTCCTGAATGACAAGATGGAAGTGTGTGTATCTGACTGTGGATTAGGTTCTTTACTATCTTCAGGCTCTGCTGATCAGGGATATGATGCTCCAGAGTTTGAATCAGGGAGTTATACACAACAGAGCGATGTATTCAGTTTCGGAGTCATGATGCTAGAACTCCTAACCAGGCGAAAAGCCTTCGACAGCTCGCGGCCTCGGGGAGAACAGCATGTGGTGAGATGGGCAGCCACTCAGCTCCATGACATAGATGCATTGTCTGAAATGGTGGATCCTTCCTTGAATGGAGCCTATCCTCCTATGAAATCCTTGTCACGTTTTGCTGATATCATTTCTTCATGTATACAGCATGAACCCGAATTCCGGCCAGCAATGTCTGAAATCGTTCAGGATCTCTTGCGAATCACGTCAAACCTTGGATAA 2052 0.4303 MGCANLALHLHILIMTVMVFTATFCVGDTDPLDVAAINSLYVALGSPPLQGWKPSGGDPCVEQWQGVSCVFSNITALHLGGMNLSGELGSNLDFPSIIEMDISNNSIGGTIPSTLPSTLKRLSLSDNKLNGSIPDALSILTQLTELSLGSNHLTGQIPDVFLQFTSLTNMNLSGNNLSGQLPPSIANLSSLTALHLQNNQLGGTLFVLEDLPLQNLNIEHNLFSGPIPPKLLTIPEFRKDGNPFNTTVIPSPPAAAPSPEAMVPSPSPSNEKSPHSVAKSPSMSMKAPAPSITRSSFEVKNIIWWIAGFGIFIFIALGISLFMCCYCKRRPRSKNYEEHTDMGVYIDVEKGHGSKLPPLQQAPPHPLPIIPGEKFISPPKSANEIEGGKQIMTSSIRVYSVASLQQYTNSFSQENYIGEGTLGPVYKGELPDGKLLAVRKLNTSMVQNHEQFLQLVSNISKIQHANIVKLIGYCSEHSQQLLVYDYCSNGTLHDALHTDDRARVKLSWNERIQVSLGAARALQYLHENFQPPIVHRNFRSSNVLLNDKMEVCVSDCGLGSLLSSGSADQGYDAPEFESGSYTQQSDVFSFGVMMLELLTRRKAFDSSRPRGEQHVVRWAATQLHDIDALSEMVDPSLNGAYPPMKSLSRFADIISSCIQHEPEFRPAMSEIVQDLLRITSNLG 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181381g00015 683 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
Stsc181381g00015 683 Gene3D Transferase(Phosphotransferase) domain 1 487 682 - -
Stsc181381g00015 683 SUPERFAMILY Protein kinase-like (PK-like) 392 676 IPR011009 -
Stsc181381g00015 683 Pfam Protein tyrosine and serine/threonine kinase 414 675 IPR001245 GO:0004672|GO:0006468
Stsc181381g00015 683 ProSiteProfiles Protein kinase domain profile. 411 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181381g00015 683 MobiDBLite consensus disorder prediction 250 264 - -
Stsc181381g00015 683 Gene3D Phosphorylase Kinase; domain 1 379 486 - -
Stsc181381g00015 683 PANTHER LEUCINE RICH REPEAT KINASE 2 41 168 - -
Stsc181381g00015 683 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 487 682 - -
Stsc181381g00015 683 MobiDBLite consensus disorder prediction 250 289 - -
Stsc181381g00015 683 SUPERFAMILY L domain-like 33 233 - -
Stsc181381g00015 683 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 255 - -
Stsc181381g00015 683 MobiDBLite consensus disorder prediction 265 289 - -
Stsc181381g00015 683 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Stsc181381g00015 683 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 378 486 - -
Stsc181381g00015 683 Gene3D Ribonuclease Inhibitor 35 248 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181381g00015 Stsc-Chr181381 87161 91173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181381g00015 19 676 Strubbelig Receptor Gene Family AT4G03390 48.452 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Stsc181381g00015 PK_Tyr_Ser-Thr 2.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181381g00015 - - gmx:100794130 913.679