Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181380g00007 ATGCATCATGATTGCATACCCCCTATTGTTCATCGCGACATATCAAGCAAGAACATTCTTTTAGATTCAGAATATGAAGCTCATGTCTCTGATTTTGGAACAGCTAAGTTCTTGAAACCTGGATCAAGTTGGAGCACGCCTGCAGTCACCTTTGGCTATGCAGCTCCAGAACTAGCACAGACAATGGAAGTGACAGAGAAAAGTGATGTATATAGCTTTGGAGTGCTTTGTTTGGAGATCATCATGGGAAAGCATCCAGGGGACCTGATAAACTCATTGTTGTCAACATCAACAACATTAATGAGCTGCAATGTGTTATTGGTTGAAGTGATAGATGAGAGGGCTCGAAATCCAGAGGAGTCAGATGTTGGTGATATAATGATGATAATGAAGTTGGCAATGAATTGCTTGAGCCACAATCCAGAATTTCGACCAAGCATGCATCAAGTGTCCAAAGAGCTTATGATGGGAAAATTGCCTTTTGCTAATGACCAATTTCCAATGATCACAATTGCACAACTCAACCAAGAATGGCAAACTCCCCTTATGTGA 552 0.4112 MHHDCIPPIVHRDISSKNILLDSEYEAHVSDFGTAKFLKPGSSWSTPAVTFGYAAPELAQTMEVTEKSDVYSFGVLCLEIIMGKHPGDLINSLLSTSTTLMSCNVLLVEVIDERARNPEESDVGDIMMIMKLAMNCLSHNPEFRPSMHQVSKELMMGKLPFANDQFPMITIAQLNQEWQTPLM 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181380g00007 183 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181380g00007 183 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Stsc181380g00007 183 Pfam Protein kinase domain 5 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181380g00007 183 Gene3D Transferase(Phosphotransferase) domain 1 1 173 - -
Stsc181380g00007 183 SUPERFAMILY Protein kinase-like (PK-like) 1 155 IPR011009 -
Stsc181380g00007 183 PANTHER LEUCINE RICH REPEAT KINASE 2 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181380g00007 Stsc-Chr181380 33945 34585 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181380g00007 1 154 Receptor kinase-like Gene Family AT1G72180 41.463 1.81e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc181380g00007 Pkinase 5.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181380g00007 - - ahf:112744368 265.388