Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181380g00004 ATGGGGAGTTCCAATAATGATTACTACCTTCACCTTATTGTTTCATCGTTTCTTCTTTTCACATTCTTGCCTGAAACTGTCCATGGCATCAAAAAGTGCTACATTGTGTACATGGGAGCACATTCTCATGGGCCAAGCCCTACCTCTCTTGACATGGAAGCTGCCACAAATTCTCACTATCATTTACTTGCTTCAGTTTTGGGAAGCCATGAGAAAGCGAAAGAAGTGATGATATACTCATACAATAAGCACATCAATGGCTTTGCCGCTTTACTTGACGACGAAGAAGCTGCAATTATTGCAAAAAAACAGGATGTGGTGTCGGTGTTCTTGAGCAAAGAGCGGAAACCTCAAACAACAAGGTCATGGGAATTTCTTGGACTACGAAGAAATGCTAAGAACACTGCATGGCAAAAGGGTAGATTTGGTGAAAATACAATCATCGCCAACATTGACACAGGGGTTTGGCCTGAACTGAGAAGCTTTAACGACAAGGGATATGGCCCCGTCCCATCAAAATGGCGAGGTGGCAACGTTTGCCAATTAGACAAACGCCCTCGTTCCATTAGAAATCCTTGTAACAGGAAGCTAATCGGAGCTAGATACTTCAGCAAAGCTTTTGAGGCAACTAATGGAAACATCATCAAGCCAAGCATGCACACAGCTCGTGACTTCGAGGGTCACGGCACTCACACTCTATCCACCGCTGGTGGCAATTTTGTTGAAGGAGCACATGTCTTTGCAGTTGGTAACGGCACCGCAAAAGGTGGGTCCCCACGTGCCAGAGTGGCAGCCTACAAAGTTTGCTGGTCTCCAGAAGATGAAAAGAGTTGCCATGAGGCTGATATATTGTCTGCAATAGATCAAGCCATTAGCGATGGTGTTGATATCATTAACCTCTCTGTTGGTGGTCGCCAAGCTGTAACTGCCGAAGATACCTTCACTGATGCGGTTTCCATAGGGAGCTTCCATGCAGTTTCTAGAAACATCTTAATAGTTGCCTCTGCTGGCAACGATGGACCTACACCTCAAACTGTTGTCAATGGGGCTCCCTGGATCTTCACCATTGGTGCTAGCACAATAGATAGGGACTTTCGCAGTATCATTACCTTCAGTGACGGTCGACAAATCCAGGGAGGCAGTCTTTCTGTAACGTTGCCACCTAACCAGGCCTTTGATTTTATCCTGGCTACGGACGGTAAACTTGCCAATGCAACAATTCAAGATGCTCAATTTTGTAGGCCGGGAACACTTGACCGTACAAAAGTTGCAGGCAAAATTGTGAAGTGCATGAGAGAAGGGAATATAAAATCAGTTGTTGAGGGTCTGGAAGCTAGAGACGCGGGTGCATTGGCAATGCTTCTGGAAAATCAAGAGAAACAAGGGAGAACGCTTAGTGCTGAACCTCAGATGGTCCCCAGTGTCAATTTTCGCCACCGTGGGAGTGGTGGAAGATCTCAAGACTTTCCTTATTTTCTCAATGCTTCTTATTATGAAGTCATAACTGCCACAACTCCTCCTTCTCCGACGCCGTCTCTTACAGTAAAGCTCTCCAAAGCAACAACCGTTATTGGAACCAAGCCAGCTCCGGTTATGGCTTCTTACTCATCTAGAGGACCCAATAAGATTCAGCCATCCATACTCAAGCCTGATGTGATTGCACCTGGAGTGAACATACTTTCTTCATATTCACTAGGAGCAAGTCCCTCTGATCTTCAACAAGATCGTCGTCGATTCGAATTCAATGTGCTGCAAGGAACTTCTATGTCCTGTTCTCATGTTTCTGGCATTGCTGGACTTGTCAAAACACGTTATCCTAATTGGAGCCCTGCAGCTATTAGATCTGCAATCATGACCACTGCAACCACAAGGGACAACAGAAACAGGCCAATTCAGGATGCATTTGATCGTGATTTAGCAAACTCTTTTGATTACGGATCAGGACATGTTCAACCTAACCTTGCAATGGAGCCAGGACTTGTTTATGATCTTCACCTTATTGATTACCTCAACTTCTTATGTGCATCTGGATACGACCAACAAGCCATTTCAGCACTTAATTTCAAGAGAACTTTTGTTTGTAAAGGAACTCATAGAATTGATGACTTGAACTACCCTTCAATTACACTATCAAATCTTGGGTCGAGTTCAGTAACGGTTATTCGTACCTTAACCAATGTAGGCCCTTCAGGCACATATAATGCAACTGCCAAAGTGGATGGATGCAGAATTACGATTGTGCCTAGTTCATTGACTTTCAAGAGAATGTATGAGAAGAAGACATTTAAGGTGATTGTGCAGGCATCAAGTGTGATTCAACTTAACAAATATCAATTTGGTGAATTGATATGGACAGATGGAAAGCGCAGAGTGAGGAGTCCTATTACAATCAGACGCCGCAACTGA 2406 0.4422 MGSSNNDYYLHLIVSSFLLFTFLPETVHGIKKCYIVYMGAHSHGPSPTSLDMEAATNSHYHLLASVLGSHEKAKEVMIYSYNKHINGFAALLDDEEAAIIAKKQDVVSVFLSKERKPQTTRSWEFLGLRRNAKNTAWQKGRFGENTIIANIDTGVWPELRSFNDKGYGPVPSKWRGGNVCQLDKRPRSIRNPCNRKLIGARYFSKAFEATNGNIIKPSMHTARDFEGHGTHTLSTAGGNFVEGAHVFAVGNGTAKGGSPRARVAAYKVCWSPEDEKSCHEADILSAIDQAISDGVDIINLSVGGRQAVTAEDTFTDAVSIGSFHAVSRNILIVASAGNDGPTPQTVVNGAPWIFTIGASTIDRDFRSIITFSDGRQIQGGSLSVTLPPNQAFDFILATDGKLANATIQDAQFCRPGTLDRTKVAGKIVKCMREGNIKSVVEGLEARDAGALAMLLENQEKQGRTLSAEPQMVPSVNFRHRGSGGRSQDFPYFLNASYYEVITATTPPSPTPSLTVKLSKATTVIGTKPAPVMASYSSRGPNKIQPSILKPDVIAPGVNILSSYSLGASPSDLQQDRRRFEFNVLQGTSMSCSHVSGIAGLVKTRYPNWSPAAIRSAIMTTATTRDNRNRPIQDAFDRDLANSFDYGSGHVQPNLAMEPGLVYDLHLIDYLNFLCASGYDQQAISALNFKRTFVCKGTHRIDDLNYPSITLSNLGSSSVTVIRTLTNVGPSGTYNATAKVDGCRITIVPSSLTFKRMYEKKTFKVIVQASSVIQLNKYQFGELIWTDGKRRVRSPITIRRRN 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181380g00004 801 Pfam Subtilase family 143 627 IPR000209 GO:0006508|GO:0008236
Stsc181380g00004 801 FunFam Subtilisin-like protease SBT1.5 145 380 - -
Stsc181380g00004 801 CDD Peptidases_S8_3 116 622 IPR034197 -
Stsc181380g00004 801 CDD PA_subtilisin_like 369 475 - -
Stsc181380g00004 801 Gene3D Peptidase S8/S53 domain 146 669 IPR036852 GO:0004252|GO:0006508
Stsc181380g00004 801 Gene3D - 673 800 - -
Stsc181380g00004 801 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 796 IPR045051 -
Stsc181380g00004 801 PRINTS Subtilisin serine protease family (S8) signature 585 601 IPR015500 -
Stsc181380g00004 801 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Stsc181380g00004 801 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Stsc181380g00004 801 FunFam Subtilisin-like protease SBT5.3 24 118 - -
Stsc181380g00004 801 ProSiteProfiles Serine proteases, subtilase domain profile. 122 656 - -
Stsc181380g00004 801 SUPERFAMILY Subtilisin-like 118 660 IPR036852 GO:0004252|GO:0006508
Stsc181380g00004 801 Pfam Peptidase inhibitor I9 34 116 IPR010259 -
Stsc181380g00004 801 Gene3D - 362 524 - -
Stsc181380g00004 801 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 117 IPR037045 -
Stsc181380g00004 801 Pfam Fibronectin type-III domain 702 797 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181380g00004 Stsc-Chr181380 13702 19567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181380g00004 30 798 Subtilisin-like Serine Gene Family AT5G59810 48.320 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181380g00004 - - aip:107635251 1186.02