Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181378g00016 ATGATAATGATGAGTTCAGTTCTGAGTTCCTTACTAAGAGCTACCAATCTCACTCTACTTTTTCTAATCTTAATTATTCCATTACTCTTTCTTTTGAAGAAAACCTCCAAAGCTGCCCGCCGCCGAGGACTCAAAGAGCCACCGTTAGCGGCGGGTGCATGGCCCATAATTGGCCATCTCTGGATCTTCAGAAGCTCCCAGCCGCCTCAGAAAACTCTAGGAGCCATGGCTGACAAGTACGGACCCATATTCAGGATCAAGATCGGATCACAACGTGCCGTGGTCATCAACAACTGGAAAACCGCTAAGGAATGCTTCACCACCAACGACATCGCCCTGTCATCGCGCCCTAGGCTCATCGCCATCCAAGGCTTGACTTACAACCAAGCCATGTTTGCTTTCACACCTTATTGCCCTTACTGGCGCGAAGTGCGAAGGATTTGCAACCAAGAATTGCTCTCAAATCGCCAAATCGAGTTATCAAGCCACGTTCGCGTCTCTGAAGTAGAAGCCGGAATTAAAGCGCTTTTCAAACAGTGGACTGAGAAGAAGAAGAACGACGGCTCCGGCGGGTACGTTGCGGTGGAGATGAGGAAGTGGTTTGGGGAATTAATGCTGAGAACAGTTGTTAGAGTGGTTGTTGGAAAGCGAAGTTTTGGATCTGAGGAGGAAGCACAGCGGTGTCTGAAAGCGTTGAGAGATTTGATGCGGCAGTTGGGGTTGTTTTTGGTGGGTGATGCTGTGCCTTGGCTTCGGTGGCTGGACTTTGGCGGCCACGAGAAAGCCATGAAAGAAACTGCTAAGGAGACGGATGCCATTGTAGGGGAGTGGTTGGAGGAGCATCGGCGGAGAAGAGCTTGTGGTGATGAGGTTGGGAGTCAGGATTTCATGGACGTCATGCTTTCAATTCTTGATGGTGCTGAGCTTGGAGGATTTGATTCCGATACCATCATCAAATCCACCATTTTGATTCTGATGGCAGGATCCATTGACACCACTTCAGGAACTCTTATATGGATCCTATCTTGTATGTTGAACAATCCAGCCACCATAGAACTTGCACAAAAGGAGTTGGACATCCATGTTGGTAAAGAAAGATTTGTTAAAGAAACCGACCTAAGTAAGTTGGTATACATTCAAGCCATCGTTAAAGAGACATTAAGGCTATACCCTACAGCAGTCTTTTCAGGACCTCGTGAGTTCGCAGATGATTGCTTTGTTAATGGCTACTACATTCCAAAGGGAACGCAACTAATCACAAATTTATGGAAGATTCACACGGATCCTAGCATCTGGTCTGAGCCATTGGACTTTAAGCCAGAGAGGTTCCTTACCACTCACAAAAATGTTGATGCCAGAGGTAACCACTTTGAGTTGATCCCATTTGGAAGTGGGAGAAGAATCTGTGTGGGATTATCATTTGCCATACCCATGATTCATCTAGCTTTGGCTACTTTGTTGCAATGCTTTGAAATTTCAAAGCCATCTGATGAACCCATTGATATGAGTGAAGTGTATGGCCTCACAACCGCGAAAATTAATCCACTTGATGTTCTCATCAAGCCACGCCTTTCTTCCAGGCTTTATGATTTAGCATAA 1599 0.4609 MIMMSSVLSSLLRATNLTLLFLILIIPLLFLLKKTSKAARRRGLKEPPLAAGAWPIIGHLWIFRSSQPPQKTLGAMADKYGPIFRIKIGSQRAVVINNWKTAKECFTTNDIALSSRPRLIAIQGLTYNQAMFAFTPYCPYWREVRRICNQELLSNRQIELSSHVRVSEVEAGIKALFKQWTEKKKNDGSGGYVAVEMRKWFGELMLRTVVRVVVGKRSFGSEEEAQRCLKALRDLMRQLGLFLVGDAVPWLRWLDFGGHEKAMKETAKETDAIVGEWLEEHRRRRACGDEVGSQDFMDVMLSILDGAELGGFDSDTIIKSTILILMAGSIDTTSGTLIWILSCMLNNPATIELAQKELDIHVGKERFVKETDLSKLVYIQAIVKETLRLYPTAVFSGPREFADDCFVNGYYIPKGTQLITNLWKIHTDPSIWSEPLDFKPERFLTTHKNVDARGNHFELIPFGSGRRICVGLSFAIPMIHLALATLLQCFEISKPSDEPIDMSEVYGLTTAKINPLDVLIKPRLSSRLYDLA 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181378g00016 532 FunFam Cytochrome P450 82C4 37 521 - -
Stsc181378g00016 532 Gene3D Cytochrome P450 31 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 SUPERFAMILY Cytochrome P450 53 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 CDD CYP82 81 523 - -
Stsc181378g00016 532 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 Pfam Cytochrome P450 51 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00016 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Stsc181378g00016 532 PANTHER CYTOCHROME P450 82C3-RELATED 22 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181378g00016 Stsc-Chr181378 84243 86560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181378g00016 18 529 Cytochrome P450 AT4G31940 45.143 1.21e-161 468