Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181378g00015 ATGGCTGACAAATACGGACCCATATTCAGGATCAAGATCGGATCAAAACGTGCTGTGGTCATCAACAACTGGAAAACCGCTAAGGAATGCTTCACCACCAACGACATCGCCCTGTCATCGCGCCCTAGGCACATCGCCCACCAACGCTTGACTTACAACCTAGCCATGTTTGGTTTCACACCCTATGGCCCTTACTGGCGCGAAGTGCGAAGGATTTCCACCCAAGAATTGCTCTCGAATCGCCAGATCGAGTTATCAAGCCACGTCCGCGTCTCTGAAGTAGAAGCCAGAATTAAAGCGCTTTTCAAACAGTGGGCTGAGAAGAAGAAGAACGACGGCTCCGGCGATGTTGCGGTGGAGATGAGGAAGTGGTTTGGGGAATTAACGCTGAGTACCGTTCTTAGAATGGTTGCTGGAAAGCGATGTTTTGGTTCTGAGGAAGCAGAGCGGTGTCTGAAAGCGTTGAGAGATTTGATGCGGCAGTTGGGGCTGTTTCTGGTGGGTGATGCTGTGCCTTGGCTTCGGTGGCTGGACTTTGGCGGCCACGAGAAAGCCATGAAAGAAACCGCTAAGGAAATGGATGCCATTGTAGGGGAGTGGTTGGAGGAGCATCGGCGGAAAAGAGCCTGTGGTGATGATGAGGTTGGGAGTCAAGATTTCATGGACGTCATGCTTTCAATTCTTGATGGTGCTGAGCTCGGAGGATTTGATTCCGACACCATCATCAAATCCACCACTTTGATTCTGATGGCAGGGGCCATTGACACCACTTCAGGAACTCTTGTATGGATCCTATCTTGTATGTTGAACAATACAGCTACTATAGAACTTGCACAAAAGGAGTTGGACATCCATGTTGGTAAGGAAAGATTTGTAAAAGAAACCGACATAAGTAAGTTGGTGTACATTCAAGCCATCGTTAAAGAGACATTAAGGCTATACCCTACAGCAATCTTTTCAGGACCTCGTGAGTTCACAAATGATTGCTTTGTTAATGGCTACTACATTCCAAAGGGAACGCAACTAATCACAAATTTATGGAAGATTCATACGGATCCTAGCATTTGGTCTGACTCATTGGACTTTAAGCCAGAGAGGTTCCTTACCACTCACAAAAATGTTGATGTTAGAGGTAACCACTTTGAGTTGATCCCATTTGGAAGTGGGAGAAGAATCTGTGTGGGATTATCATTTGCCATACCCGTGATTCATCTAGCTTTGGCTACTTTCTTGCAATGCTTTGAAATTTCAAAGCCATCTGATGAACCCGTTGATATGACTGAAGTCTTTGGCCTCACAACCATGAAAGCTACTCCACTTGATGTTCTCATCAAGCCACGCCTTCCTTCCAGGCTTTACGATTTAGCATGA 1371 0.4639 MADKYGPIFRIKIGSKRAVVINNWKTAKECFTTNDIALSSRPRHIAHQRLTYNLAMFGFTPYGPYWREVRRISTQELLSNRQIELSSHVRVSEVEARIKALFKQWAEKKKNDGSGDVAVEMRKWFGELTLSTVLRMVAGKRCFGSEEAERCLKALRDLMRQLGLFLVGDAVPWLRWLDFGGHEKAMKETAKEMDAIVGEWLEEHRRKRACGDDEVGSQDFMDVMLSILDGAELGGFDSDTIIKSTTLILMAGAIDTTSGTLVWILSCMLNNTATIELAQKELDIHVGKERFVKETDISKLVYIQAIVKETLRLYPTAIFSGPREFTNDCFVNGYYIPKGTQLITNLWKIHTDPSIWSDSLDFKPERFLTTHKNVDVRGNHFELIPFGSGRRICVGLSFAIPVIHLALATFLQCFEISKPSDEPVDMTEVFGLTTMKATPLDVLIKPRLPSRLYDLA 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181378g00015 456 SUPERFAMILY Cytochrome P450 1 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00015 456 Gene3D Cytochrome P450 1 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00015 456 FunFam Cytochrome P450 82C4 1 445 - -
Stsc181378g00015 456 Pfam Cytochrome P450 2 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00015 456 PRINTS P450 superfamily signature 384 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00015 456 PRINTS P450 superfamily signature 252 269 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00015 456 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00015 456 PRINTS P450 superfamily signature 305 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00015 456 PANTHER CYTOCHROME P450 82C3-RELATED 1 453 - -
Stsc181378g00015 456 CDD CYP82 6 447 - -
Stsc181378g00015 456 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 386 395 IPR017972 GO:0005506|GO:0016705
Stsc181378g00015 456 PRINTS E-class P450 group I signature 345 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00015 456 PRINTS E-class P450 group I signature 261 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00015 456 PRINTS E-class P450 group I signature 383 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00015 456 PRINTS E-class P450 group I signature 241 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00015 456 PRINTS E-class P450 group I signature 2 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00015 456 PRINTS E-class P450 group I signature 393 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00015 456 PRINTS E-class P450 group I signature 26 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00015 456 PRINTS E-class P450 group I signature 304 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181378g00015 Stsc-Chr181378 80824 82838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181378g00015 1 453 Cytochrome P450 AT4G31940 47.957 2.56e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181378g00015 - - qsu:112023929 594.349