Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181378g00014 ATGGCCACTTCCATAATGAGTTTTTGCTTCAGCGCTAATACTTATTATTATCAAATAATTGGACTAGTTTCTCTAATGTTACTACCACTACTCTTTCTCTTGCGGAGGTCAAATCTCAGCCTAAGCAGAAGAAGACAGCAGCCACCCTTAGCGGCGGGTGCATGGCCCATAATAGGCCATCTCCCGCTCTTCGCAGCTTCAGATCCACCTCACAAAACTTTTGGCGCCATGGTTGACAAATACGGACCCATTTTCACCATCAAGATCGGGTCCCAACGTGCTGCGGTCATCAACAACTGGAAAACTGCTAAAGAATGCTTCACCACCAACGACGCGGCCCTATCATCACGCCCTAGCAATCTCATCGCTGTCGAACACTTGGGCTACAAAGGAGCCATGTTTCCCTTCGCATCTGGCGCCAATCACCTGTACTGGCGCGAGATGCGAAGGATTGCCAACCAGGAGTTGCTTTCCAATAAGCGAGTGGAGCTCTTAGGCCCCATTCGTGTCTCGGAGCTAGAAAGCAGCATCGAAGCGCTCTTCAAGAAGTGGGAGGAGGAAAAGAACGAGTCGGGATACGTGGCGGTGGAGATGAAGAAGTGGTTTGGGGAGTTGATCCTCAATACGACTCTTAGAGTGGTTGCAGGGAAGAGATGCTTGGGTTCTGATGAGGAAGGACGGCGGTGTTTGAAAGCGTTGAGGGAATTCGTTCAGCAACTGGGGATGATGTTGGTGGGTGATGCGGTGCCATGGCTTCGGTGGGTGGACTTGGGTGGACACGAGAAAGCCATGAAAGAAACCGCTAAGGAATTGGACGCCATATGTGGGAAGTGGTTAGAAGAGCATCGAGAGAAAAGGGTTTTAGAAGGCGGTGATGATGGAAGGAGTCAACAAGATTTCATTGACGTCATGCTTTCGGTTCTTGATGATACTGATGAAATTGCAGGATTTGATGCGGATACCATCATCAAAGCTACAGTGCTGATCTTAACTGCAGGAGCTGTTGACACAAGCACAGTAAGCCTTACATGGATAATATCTTGTTTGCTAAATAACACTACTAGTTTGGAAGAAGCACAAAAGGAGTTGGATCTCCATGTTGGGAAAGAAAGACACGTAAAAGAATCAGACATAAGTAACTTAGTTTACATTCAAGCTATAGTCAAAGAAACATTAAGATTACACCCTCCATCAACTCTTTCCGGACTCCGTGTGTTTACAGAGGATTGCACTATTCATGGCTACCACATTCCAAAAGGAACACCGCTAATGACAAATTTGTGGAAGATTCACAGAGACCCTAGCATTTGGTTGGACCCACTTGACTTTAAGCCGGAGAGGTTTCTTACAGGTAACCACAAAAATGTTGATGTGAGAGGTAATCACTTTGAGCTGATCCCATTTGGGAGTGGGAGAAGAATCTGCCCCGGGATATCTTTTGCCATGCCTTTGATTCATCTTACTCTGGCTACTTTCTTGCAATCATTTGAAATTTCAAAGCCATCTCATGAACCCATTGATATGACTGAAAAATTTGGCTTAACAAGCACCAAGGCTACTCCTCTTGTTGTACTCATCAAACCACGTCTTTTTCCCGAGCTTTACCAAGACTTATCCTGA 1620 0.4599 MATSIMSFCFSANTYYYQIIGLVSLMLLPLLFLLRRSNLSLSRRRQQPPLAAGAWPIIGHLPLFAASDPPHKTFGAMVDKYGPIFTIKIGSQRAAVINNWKTAKECFTTNDAALSSRPSNLIAVEHLGYKGAMFPFASGANHLYWREMRRIANQELLSNKRVELLGPIRVSELESSIEALFKKWEEEKNESGYVAVEMKKWFGELILNTTLRVVAGKRCLGSDEEGRRCLKALREFVQQLGMMLVGDAVPWLRWVDLGGHEKAMKETAKELDAICGKWLEEHREKRVLEGGDDGRSQQDFIDVMLSVLDDTDEIAGFDADTIIKATVLILTAGAVDTSTVSLTWIISCLLNNTTSLEEAQKELDLHVGKERHVKESDISNLVYIQAIVKETLRLHPPSTLSGLRVFTEDCTIHGYHIPKGTPLMTNLWKIHRDPSIWLDPLDFKPERFLTGNHKNVDVRGNHFELIPFGSGRRICPGISFAMPLIHLTLATFLQSFEISKPSHEPIDMTEKFGLTSTKATPLVVLIKPRLFPELYQDLS 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181378g00014 539 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00014 539 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00014 539 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00014 539 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00014 539 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00014 539 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00014 539 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00014 539 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00014 539 Pfam Cytochrome P450 52 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00014 539 Coils Coil 170 190 - -
Stsc181378g00014 539 SUPERFAMILY Cytochrome P450 54 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00014 539 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00014 539 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00014 539 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00014 539 FunFam Cytochrome P450 82C4 39 527 - -
Stsc181378g00014 539 Gene3D Cytochrome P450 33 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00014 539 PANTHER CYTOCHROME P450 82C3-RELATED 26 535 - -
Stsc181378g00014 539 CDD CYP82 82 529 - -
Stsc181378g00014 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181378g00014 Stsc-Chr181378 77878 80590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181378g00014 49 535 Cytochrome P450 AT4G31940 47.887 1.48e-162 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181378g00014 - - cave:132183637 592.423