Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181378g00013 ATGGACTTCGAAAACCTCCTCTCCCATCCAGCCTTATTCACCATCGCTCTGCTACTTCTCTCTCTCTTTGCTCTTTCATTTCTTTCAAGAATTTACATCTACAAATCCGGAGCAAGAAAAGCACCACCAGAAGCTGCAGGAGCATGGCCACTAATCGGCCACCTCCACCTCTTAGGTGGCCCACAGCCACCGCACGTCACCTTGGGCAACATGGCCGACAAATACGGACCCATCTTCACCATCCGCATCGGCGGCCGCAAGAAACTATTAGTTGTGAGCAATAGCAAGATAGCCAAAGAGTGCTTCACTCTCAATGACAAAGCTTTCGCTGGCCGCCCTAAAATGGTAGCCTTTGAAATTCTGGGCTACGACTTCGCCATATTCTCCTTCAAATCTTATGGCCCTTATTGGCGTAACCTCCGCAAAACCGCCATCTTGGAAGTCCTCTCCGACCACAAGATACACATGAACAGTCACGTGATGCTGTCGGAGGTGAAAACCGCAGTGAAAGATAGTTACAACAAAAAGGGCATGGTGGTTACGGAGATGGATAAATGGTTTGGGGAGATCAGCCTGAACGTGTTGTTCAGGTTAGTGGTGGGAAAACGTTTCTCTGGTGAGAGTGAAGAGAACGAAGGGATCCGTAAGGCGCTGAGGGATTTCTTTGATCTTGGTGCGTCGTTCGTGGTTGGTGATGCAATTACGTGGTTGAGATGGCTGGATTTGGATGGGGGAGAGAAGGCCATGAAGAAAACGGCAAAAGAGTTGGATGAATTTATGCAGAGCTCATTAGATGAACACAGACGAAGCAGAAAGCATGGTGCAGAACGTGATTACATGGATAAGCTTATTTCCACCATTGATCAAGGCTTTGACGGTGGAGATGTTGATACTATAATCAAAGCTACATCCCTGACACTAATTTTGGCTGGTACAGACACAACAACTGGAACACTTGTTTGGGCTCTTGCTTTACTTTTGAATAATCGCCAAGTTCTTGATAAAGCTATTCATGAATTAGACACATATATAGGAACAAATAGAACTGTAGAAGTAACGGATCTAAACAATCTTGTGTATCTTCAAGCCATTATCAAAGAAACACTGCGAATGCATCCACCTGTGGTGCTCAATTTGCCCCATGAATCCATGAACGATTGTGTGGTGGGTGGATACCATATTCCTGCTGGCACGCAGCTTTGGACTAATATTTGGAAAATACAACGAGATCCTGCTTTATATTCTAATCCCTTAGAGTTTCAACCTGAGAGATTTTTGGAAACTCACAAAGATATAGATCTTAGGGGTCAGCACTTTGAGTTGATTCCATTTGGTGCAGGAAGAAGAATTTGTCCTGGAATGTCATTTGGTCTTCAAATGGTGCAGTTAATCCTTGCTAATGTGTTGCACGGGTTTGACATTGTAACGGTTGATGGAAAATCAGTTGATATGATTGAACGTGTTGGAATAACCAGCATTAAAGCCAATCCACTAAAAGTTATTCTTACACCACGTCTCTCTGCCAAAGCTTATGCTGAAATTGAAGAAAAGCACAACACTATTGTATGA 1569 0.4404 MDFENLLSHPALFTIALLLLSLFALSFLSRIYIYKSGARKAPPEAAGAWPLIGHLHLLGGPQPPHVTLGNMADKYGPIFTIRIGGRKKLLVVSNSKIAKECFTLNDKAFAGRPKMVAFEILGYDFAIFSFKSYGPYWRNLRKTAILEVLSDHKIHMNSHVMLSEVKTAVKDSYNKKGMVVTEMDKWFGEISLNVLFRLVVGKRFSGESEENEGIRKALRDFFDLGASFVVGDAITWLRWLDLDGGEKAMKKTAKELDEFMQSSLDEHRRSRKHGAERDYMDKLISTIDQGFDGGDVDTIIKATSLTLILAGTDTTTGTLVWALALLLNNRQVLDKAIHELDTYIGTNRTVEVTDLNNLVYLQAIIKETLRMHPPVVLNLPHESMNDCVVGGYHIPAGTQLWTNIWKIQRDPALYSNPLEFQPERFLETHKDIDLRGQHFELIPFGAGRRICPGMSFGLQMVQLILANVLHGFDIVTVDGKSVDMIERVGITSIKANPLKVILTPRLSAKAYAEIEEKHNTIV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181378g00013 522 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00013 522 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00013 522 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00013 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Stsc181378g00013 522 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00013 522 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00013 522 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00013 522 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00013 522 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00013 522 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00013 522 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00013 522 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00013 522 Gene3D Cytochrome P450 34 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00013 522 FunFam Cytochrome P450 82C4 34 503 - -
Stsc181378g00013 522 SUPERFAMILY Cytochrome P450 47 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00013 522 PANTHER CYTOCHROME P450 82C3-RELATED 24 511 - -
Stsc181378g00013 522 Pfam Cytochrome P450 47 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181378g00013 Stsc-Chr181378 73217 75748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181378g00013 18 511 Cytochrome P450 AT4G31940 44.101 4.62e-152 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181378g00013 - - gmx:100787630 642.884