Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181378g00012 ATGGATTTGGAAAACCTCCTCTCCCAACCAGCCATATTCACCGTGGCTGTGCTATTCTTCTTTCTCTTTGCTTTTTCATTTCTATTCAGAAGGCACGTCCACAAATCCGGAGCAAGAAAAGCACCACCAGAAGCTGCTGGAGCATGGCCCCTAATCGGGCACCTCCACCTCTTACGTGGCCCACAGCCACCGCATGTAACTTTAGGCAACATGGCTGACAAGTATGGACCCATTTTCACCATACGCGTTGGCGGCCGCAAGAATTTGATCGTGAGCAACAGCGACATGGCCAGAGAGTGTTTCACTGTGAATGACAAGGTTTTCGCCGCACGCCCTAAAATGACAGCCTTTGATGTTCTTGGTTACAACTCCGCAATATTCACGTTCACCACCTATGGCGCCTGTTGGCGTAACCTCCGGAAGATGGCCATCTTGGAAGTCCTCTCCCACCACAGGATAGAGATGAACAGTCACGTGATGCTATCCGAGGTGAAAACCGCAATGAAAGATAGTTACAACAAAAAGAGCATGGTGGTTACGGAGATGGATAAATGGTTTGGGGAGATTAGCCTGAACGTGCTGTTCAGGTTAGTGGTGGGAAAACGTTTCACTGGTATCAGTGAAGATAACAAACGGTTCCGGAAGGCCTTGAGGAGTTTCGTTGATCTTGCTACATCGTTTGTGATTGGTGACGCAATTCCGTGGTTGAGATGGTTGGATCTAGATGGAGGAGAGAAGGCCATGAAGAAAACAGCAAAAGAGTTGGATGGATATGTTCAAACATGGTTAGATGAACACAGACGCAACAGAAACCATGGCGCAGACCGTGATTACATGGATGCGCTTATTTCGAATATCAATCAAGGCTTTGAGGGTTACGACGCTGACACTCTAATCAAAGCTTCGTCCTTGACATTAATTTTGGCAGGTACAGACACAACAACTGCCACACTTACTTGGGCACTTGCTTTACTTTTGAATAATCGCCATGTTCTAAATAAAGTTGTCCATGAATTAGATACACAAATAGGAAAAGATAGAATAGCGGAAGAAACAGATCTAAAGAATCTTGTGTATCTTCAAGCAGTTGTCAAAGAAACAATGCGCTTATACCCTGCTGTGGTGCTTAGTGTGCCTCACGAATCCATGAAAGATTGTGTGGTGGGTGGATACCGTATCCCTGCTGGCACTCAGCTTTGGACTAATATTTCGAAAATACAACGGGATCCTACTTTATATCCTGATCCATTAGAGTTTCGACCAGAGAGATTTTTGACAACTCATAAAGACATCGACCTTAGGGGACAACACTTTGAATTGATTCCATTTAGTTCGGGAAGAAGGATGTGTCCTGGAATGTCATTTGGTCTTCATATAATGCACTTAACACTTGCTAATTTGTTGCATGCATTTGATATTGTAACAGCAGATGGGAAACCAGTTGATATGATCGAACGTGCTGGGATAACTAATGCTAAAGCCAATCCCCTTGAAGTCATTCTAACACCACGTCTCTCTACCGAAGCCTATGCTTAA 1536 0.446 MDLENLLSQPAIFTVAVLFFFLFAFSFLFRRHVHKSGARKAPPEAAGAWPLIGHLHLLRGPQPPHVTLGNMADKYGPIFTIRVGGRKNLIVSNSDMARECFTVNDKVFAARPKMTAFDVLGYNSAIFTFTTYGACWRNLRKMAILEVLSHHRIEMNSHVMLSEVKTAMKDSYNKKSMVVTEMDKWFGEISLNVLFRLVVGKRFTGISEDNKRFRKALRSFVDLATSFVIGDAIPWLRWLDLDGGEKAMKKTAKELDGYVQTWLDEHRRNRNHGADRDYMDALISNINQGFEGYDADTLIKASSLTLILAGTDTTTATLTWALALLLNNRHVLNKVVHELDTQIGKDRIAEETDLKNLVYLQAVVKETMRLYPAVVLSVPHESMKDCVVGGYRIPAGTQLWTNISKIQRDPTLYPDPLEFRPERFLTTHKDIDLRGQHFELIPFSSGRRMCPGMSFGLHIMHLTLANLLHAFDIVTADGKPVDMIERAGITNAKANPLEVILTPRLSTEAYA 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181378g00012 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Stsc181378g00012 511 Gene3D Cytochrome P450 32 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00012 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00012 511 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00012 511 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00012 511 PANTHER CYTOCHROME P450 82C3-RELATED 18 510 - -
Stsc181378g00012 511 FunFam Cytochrome P450 82C4 32 502 - -
Stsc181378g00012 511 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00012 511 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00012 511 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00012 511 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00012 511 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00012 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00012 511 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00012 511 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00012 511 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00012 511 SUPERFAMILY Cytochrome P450 47 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00012 511 Pfam Cytochrome P450 47 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181378g00012 Stsc-Chr181378 64531 66171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181378g00012 18 510 Cytochrome P450 AT4G31940 44.767 1.28e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181378g00012 - - gmx:100787630 637.106