Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181378g00011 ATGGACTTGGAAAACCTCGTCTCCCAATCAGTCATATTCAGCATGTCTGTGCTACTCTTCTCTCTCTTTGCTTTTTCATTTCTATTAAGAAAGCACATCCACAAAGCCGGGGCAAGAAAAGCACCACCAGAAGCTGGCGGAGCATGGCCGTTAATCGGGCATCTCCCGATCTTTGGTGGCCGACAACCACCGCACGTCACCTTGGGACACATGGCTCACAAATACGGACCCATCTTCACCATACACATCGGTAACCGCAAGAATTTAATTGTGAGCAACTGCGAGCTGGCCAAAGAGTGTTTCACTGTGAACGACATAGCTTTCGCTGGCCGTCCTAAAACGGTAGCCTTTGAAGTTCTGGGTTACGACCATGCCATGTTCGTGTTCAAAACCTATGGCGACTGTTGGCATAGCCTCCACAAGATAGCCATCTCCGAAGTCCTCTCGAACCACAGGATAGAGATGAACAAGCACGTGGTGCTGTCGGAGGTAAAGGCTGCAATGAAAGATAGTTACAACAAGAGTATGGCGGTTACGGAGATGGATAAATGGTTTGGGGAGATTACCCTAAACGTGATGTTCAGGTTGGTGGTGGGAAAACGTTTCACTGGATACAGTGAAGAAAATGAACGGATCCGGAAGATGTTGAGGAGTTTCTTTGATCTTTCTGCATTGTTCGTGATTGGTGATGCAATTCCGTGGTTGAGATGGTTGGATTTGGATGGAAGAGAGAAGGCCATGAAGAAAACGGCCAAAGAGTTGGATGAATTTATGCAGATCTGGTTAGATGAACACAAATGTAACAGAAACCATGGCGCAAATCGTGATTACATGGACGCGCTTATTTCCAATATCGATCAAGGCTTTGACGGTTACGACGTTGATACTCTAATCAAAGCTTCATCCCTGATTTTAGGAGGTACGGACACCACAGTTTCAACATTAACTTGGGCCCTTTCGTTACTTTTGAACAATCGCCAAGCCTTAAATAAAGTTGTTCATGAATTAGATACACAAATAGGAAAAAATAGAACAGCAATGGAGACAGATCTAAACAATCTTGTGTATCTTCAAGCGGTTGTCAAAGAAACATTGCGATTATATCCTCCTGTGGTGCTCAATGTACCTCACGAATCCATGAAAGATTGTGTGGTGGGTGGATACCATATCCCTGCTGGCACGCAGCTTTGGACTAATCTTTCAAAAATGCAAAGGGATCCTGCTTTATATCTTGATCCGTTAGAGTTTCAACCTGAGAGATTTCTTACAACTCACAAAGACATCGATTTTAAGGGTCAGCACTTTGAATTGATTCCATTTGGTGCAGGAAGAAGAACGTGTACTGGAAAATCATTTGGGCTTCGAATGGTACACTTAACACTTGCTAATGTGCTGCATGGGTTTGATATTGCAACAGTTGATGGAAAGCCGGTTGATATGGCTGAACGTGTTGGGTTAACAAATGCCAAAGCTAATCCGCTCAAAGTAATTCTTACACCACGTCTCTCTCATGAAGCTTATGCTTAA 1527 0.4394 MDLENLVSQSVIFSMSVLLFSLFAFSFLLRKHIHKAGARKAPPEAGGAWPLIGHLPIFGGRQPPHVTLGHMAHKYGPIFTIHIGNRKNLIVSNCELAKECFTVNDIAFAGRPKTVAFEVLGYDHAMFVFKTYGDCWHSLHKIAISEVLSNHRIEMNKHVVLSEVKAAMKDSYNKSMAVTEMDKWFGEITLNVMFRLVVGKRFTGYSEENERIRKMLRSFFDLSALFVIGDAIPWLRWLDLDGREKAMKKTAKELDEFMQIWLDEHKCNRNHGANRDYMDALISNIDQGFDGYDVDTLIKASSLILGGTDTTVSTLTWALSLLLNNRQALNKVVHELDTQIGKNRTAMETDLNNLVYLQAVVKETLRLYPPVVLNVPHESMKDCVVGGYHIPAGTQLWTNLSKMQRDPALYLDPLEFQPERFLTTHKDIDFKGQHFELIPFGAGRRTCTGKSFGLRMVHLTLANVLHGFDIATVDGKPVDMAERVGLTNAKANPLKVILTPRLSHEAYA 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181378g00011 508 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 PANTHER CYTOCHROME P450 82C3-RELATED 19 507 - -
Stsc181378g00011 508 SUPERFAMILY Cytochrome P450 48 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 FunFam Cytochrome P450 82C4 32 499 - -
Stsc181378g00011 508 Pfam Cytochrome P450 45 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00011 508 Gene3D Cytochrome P450 36 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181378g00011 Stsc-Chr181378 60654 62598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181378g00011 15 507 Cytochrome P450 AT4G31940 43.403 2.31e-152 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181378g00011 - - gmx:100787630 640.958