Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181378g00010 ATGGACCCATTTTCACCATACGAGTGTTTCACTGTGAATGATAAAGCTTTCGCCGCCCGCCCTAAAATGACAGCCTTTGAAGTTCTTGGTTACAACTACGCAATATTCACGTTCACCACCTATGGCGCCTGTTGGCGTAACCTCCGGAAGATGGCCATCTTGGAAGTCCTCTCCCACCACAGGATAGAGATGAACAGTCACGTGATGCTATCCGAGGTGAAAACCGCAATGAAAGATAGTTACAACAAAAAGAGCATGGTGGTTACGGAGATGGATAAATGGTTTGGGGAGGTTAGCTTGAACGTTTTGTTCAGGTTAGTGGTGGGAAAACGTTTCACTGGTTACAGTGAAGAGAACGAACGGATCCGGAAGGCCTTGAGGAGTTTCTTTGATCTTGCTGGATTGTTTGTGATTGGTGACGCAATTCCGTGGTTGAGATGGTTGGATCTAGATGGAGGAGAGAAGGCCATGAAGAAAACAGCAAAAGAGTTGGATGGATATGTTCAAACATGGTTAGATGAACACAGATGCAGCAAAAACCATGGCGCAGACAGCGATTACATGGACGCGCTTATTTCCAATATCAATCAAGGCTTTGACAGTTACGACGTTGACACTCTAATCAAAGCTTCGTCCCTGACACTAGTTTTGGCAGGTACAGACACAACAGTTGCAACATCAACTTGGGCTCTTTCATTGCTTTTGAACAATCGCCAAGCCTTGAATAAAGTTATTCAGGAATTAGACTCAAAAATAGGAACAAAAAGAACTGTGGTAGAAACTGATCTAAAAGATCTTGTATATCTTCAGGCAATTGTTAAAGAAACATTGCGCTTGTATCCTCCTGTAGTGCTTAACGTGCCTCATGAAGCCACAGAAGATTGTGTGGTGGGTGGATACTACATCCCTGCTGGCACGCAACTTTTGACTAATATTTGGAAAATGCAAAGAGATCCTGCTTTATATCCTGACCCATTAAAATTTCGGCCGGAGAGATTTCTCACAACTCACAAAGATGTGGATCTTAGGGGCCAACATTTTGAATTGATTCCATTTGGTGCAGGAAGAAGAATGTGTCGTGGAATATCATTTGGACTTCAAATGGTGCAGTTAACACTTGCTAATGTGTTGCATGGGTTTGACATTGTAACAGCTGATGGGCAATTAGTTGATATGGCTGAACGTGTTGGGTTAACCAATGCCAAAGCTAATCCGCTCAACGTAATTCTAACACCACGTCTTTCTCCAAATGCTTATGCTTAA 1263 0.4299 MDPFSPYECFTVNDKAFAARPKMTAFEVLGYNYAIFTFTTYGACWRNLRKMAILEVLSHHRIEMNSHVMLSEVKTAMKDSYNKKSMVVTEMDKWFGEVSLNVLFRLVVGKRFTGYSEENERIRKALRSFFDLAGLFVIGDAIPWLRWLDLDGGEKAMKKTAKELDGYVQTWLDEHRCSKNHGADSDYMDALISNINQGFDSYDVDTLIKASSLTLVLAGTDTTVATSTWALSLLLNNRQALNKVIQELDSKIGTKRTVVETDLKDLVYLQAIVKETLRLYPPVVLNVPHEATEDCVVGGYYIPAGTQLLTNIWKMQRDPALYPDPLKFRPERFLTTHKDVDLRGQHFELIPFGAGRRMCRGISFGLQMVQLTLANVLHGFDIVTADGQLVDMAERVGLTNAKANPLNVILTPRLSPNAYA 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181378g00010 420 PANTHER CYTOCHROME P450 82C3-RELATED 8 419 - -
Stsc181378g00010 420 SUPERFAMILY Cytochrome P450 7 413 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00010 420 Gene3D Cytochrome P450 2 414 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00010 420 FunFam Cytochrome P450 82C4 5 411 - -
Stsc181378g00010 420 Pfam Cytochrome P450 13 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00010 420 PRINTS E-class P450 group I signature 311 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00010 420 PRINTS E-class P450 group I signature 5 26 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00010 420 PRINTS E-class P450 group I signature 349 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00010 420 PRINTS E-class P450 group I signature 98 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00010 420 PRINTS E-class P450 group I signature 227 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00010 420 PRINTS E-class P450 group I signature 359 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00010 420 PRINTS E-class P450 group I signature 270 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00010 420 PRINTS E-class P450 group I signature 207 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00010 420 PRINTS P450 superfamily signature 218 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00010 420 PRINTS P450 superfamily signature 271 282 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00010 420 PRINTS P450 superfamily signature 350 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00010 420 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181378g00010 Stsc-Chr181378 55451 57221 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181378g00010 8 419 Cytochrome P450 AT4G31940 45.392 3.58e-137 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181378g00010 - - gmx:100787630 557.37