Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181378g00008 ATGAAGAAAACGGCCAAAGAGTTGGATGAATTTATGCAGACCTGGTTAGATGAACACAAACGTAGCAACAGAAACCATGGCGAAGATCGTGATTACATGGACAAGCTTATTTCCAATATTGATCATGGCTCTCACGGTCACGACGTTGATACAATAATCAAAGCAACATGCGTGACATTAATTTTGGCAGGTACAGACACAAAAACTGGGACACTTACTTGGGCTCTTGCTTTACTTTTGAATAATCGTCATGCTCTAAATAAAGTTGTCCATGAATTAGACACACAAGTAGGAAAAAATAGAACGGTGGAAGAAACGGATTTAAAGAATCTTGTGTATCTTCAGGCAGTCGTCAAAGAAACATTGCGGTTATACCCTCCTGTGGTGCTTAATGTGCCTCATGAATCCATGAAAGATTGTGTGGACATCGATCTTAGGGGTCAACACTTTGAATTGATTCCATTTGGTTCAGGAAGAAGAATGTGTCCAGGAATGTCATTTGGTCTTCATATAGTGCACTTAGCACTTGCTAATGTGTTGCATGCATTTGATATTGTAACAGCAGATGGGAAACCAGTTGATATGGTTGAACGTGTTGGATTAACCAATGCTAAAGCCAATCCTCTTGAAGTCATTCTAACACCGCGTCTCTCCGCCGAAGCCTATGCTTAA 672 0.4048 MKKTAKELDEFMQTWLDEHKRSNRNHGEDRDYMDKLISNIDHGSHGHDVDTIIKATCVTLILAGTDTKTGTLTWALALLLNNRHALNKVVHELDTQVGKNRTVEETDLKNLVYLQAVVKETLRLYPPVVLNVPHESMKDCVDIDLRGQHFELIPFGSGRRMCPGMSFGLHIVHLALANVLHAFDIVTADGKPVDMVERVGLTNAKANPLEVILTPRLSAEAYA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181378g00008 223 PANTHER CYTOCHROME P450 82C3-RELATED 1 141 - -
Stsc181378g00008 223 PRINTS P450 superfamily signature 153 162 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00008 223 PRINTS P450 superfamily signature 63 80 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00008 223 Gene3D Cytochrome P450 147 219 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00008 223 Pfam Cytochrome P450 147 199 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00008 223 Pfam Cytochrome P450 2 141 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00008 223 SUPERFAMILY Cytochrome P450 1 216 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00008 223 Gene3D Cytochrome P450 1 146 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00008 223 PRINTS E-class P450 group I signature 152 162 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00008 223 PRINTS E-class P450 group I signature 162 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00008 223 PRINTS E-class P450 group I signature 72 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00008 223 PRINTS E-class P450 group I signature 52 69 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00008 223 PRINTS E-class P450 group I signature 115 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181378g00008 223 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 155 164 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181378g00008 Stsc-Chr181378 41340 42369 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181378g00008 1 222 Cytochrome P450 AT4G31940 41.328 5.95e-70 221