Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181373g00001 ATGTGCTTACACTCCTCTAATGTGCACCGCTCATCACCAATCGAGCAACAACTCTGCAGAGATCCACCAATCGCGTCGTTGTCAAACACCTCAAATGCCTCCTTCAGCTCATCCTCCTCCTTCATCGGAATCACCAACGGAACCGACTCGACTTACCAGCTCCTCGATACAACCACAACCCTCAGCGTCCACATCACACCGCATTGCCGCCACCTTCTCCGCTTGCAGCGCTGTCAAGCACGTCTAAAATGCCTTGATGAGCTCCTAACGAGATTATGTTGCAAGAGCCCTTACTTCATAGATTGGCCTATCATTGGCATGTTACCAAAAGTGTTGTGGAACTTGCATAGGATCCATGATTTCGCAACCGACGACATTTTTAAACAACGTGGAAAAACCGGCGAATTCATGGGACCTTGGTTCACCAAAATGAACTATTTGGTCACCAGTGACCCCATGAATGTGCATCACATGATGAGCAAGAATTTTGACAACTATGTCAAGGGCTCTGAGTTCCGCGAGATTTTCCAAGTCTTTGGAATTGGAATTTTCACGTCGGATTCGGAGACCTGGAGGTACCATAGGTCTTTACTTCTCTCATTTTTCAAGAACAAAACGTTCGAGATGTTTCTAGAGAAGACAATCCAAAAGAAGGTAAAAGGTAGCTTAATTCCCATGTTAGAACATGTGAAACAACAAGGGATTGAGATTGATCTACAAGATGTCTTCAGCAGGTTCACATTTGATAACATATGTTCTATAGTTTTAGGATATGATCCTAATTGTCTTTCTATTGAGTTCCCTCATGTTGCATGTGAGAAGGCTTTTAATGAAGCTGAAGAATCTATATTCTATAGGCATGCTGTTCCAAGGAGTATTTGGAGGCTTCTAAAATGGCTTCAAATAGGTGAAGAGAGAAAGATGAGTGAAGCTTGCAAGGTGTTTGACCAATTCATATATTCATGCATAGCATCAAAGAAAGAAGAGCTAAGCAAGTATAACAAAAGTAGTCAAATAGATGAATCTCAAGTTGACTTGCTTAGTGTTTTGATGACTATGAGAAAAGAAGAATCCAAAAAAGGTCAAACCCTAATACATGATGATAAATTTCTAAGAGATTCAACTTTCAATATTTTTGTAGCCGGAAGAGATACCCTAACTTCAGCTCTTACTTGGTTCTTTTGGCTTGTTGCTAAAAATCCCTTAGTTGAATCCAAAATTCTTGATGAGATCAAGAAAAATTTCGTAGCAAATAATGATTATGACATGAAACACAATGTCTTAAGCATTGAAAAGGTGAAAAAGCTAGTTTATCTCCATGCTGCTTTTTGTGAATCTTTGAGGCTTTTTCCTCCGATTCCTTTCGAGAGCAAGCAAGCAATCAATTATGACATACTCCCTAGTGGGCATCATGTTAATCCAAGTACAACGATTTTACTTTCTTTGTTTTCAATGGGAAGATTTGAAGAGACATGGGGAAAAAATTGCTTGGAGTTTAAACCAGAACGATGGATTTCTGACAAAGGAGGAATAATGCATGTGCCTTCTTATAAGTTTATTAGCTTTAATGCCGGACCAAGAACTTGTTTGGGAAAAGACTTGTCTTTTATGCAACTGAAGATGGTGGCAGCTGCTATTTTATGCAATTATTGTATACAAGTGGTGGAAGGTCATGAAGCTATACCAAACCTTTCAATTGTTCTTCTAATGAAGAATGGTTTGAAG 1725 0.3948 MCLHSSNVHRSSPIEQQLCRDPPIASLSNTSNASFSSSSSFIGITNGTDSTYQLLDTTTTLSVHITPHCRHLLRLQRCQARLKCLDELLTRLCCKSPYFIDWPIIGMLPKVLWNLHRIHDFATDDIFKQRGKTGEFMGPWFTKMNYLVTSDPMNVHHMMSKNFDNYVKGSEFREIFQVFGIGIFTSDSETWRYHRSLLLSFFKNKTFEMFLEKTIQKKVKGSLIPMLEHVKQQGIEIDLQDVFSRFTFDNICSIVLGYDPNCLSIEFPHVACEKAFNEAEESIFYRHAVPRSIWRLLKWLQIGEERKMSEACKVFDQFIYSCIASKKEELSKYNKSSQIDESQVDLLSVLMTMRKEESKKGQTLIHDDKFLRDSTFNIFVAGRDTLTSALTWFFWLVAKNPLVESKILDEIKKNFVANNDYDMKHNVLSIEKVKKLVYLHAAFCESLRLFPPIPFESKQAINYDILPSGHHVNPSTTILLSLFSMGRFEETWGKNCLEFKPERWISDKGGIMHVPSYKFISFNAGPRTCLGKDLSFMQLKMVAAAILCNYCIQVVEGHEAIPNLSIVLLMKNGLK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181373g00001 575 SUPERFAMILY Cytochrome P450 98 574 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181373g00001 575 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 522 531 IPR017972 GO:0005506|GO:0016705
Stsc181373g00001 575 Pfam Cytochrome P450 112 565 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181373g00001 575 CDD CYP86A 135 574 - -
Stsc181373g00001 575 PANTHER CYTOCHROME P450 96 574 - -
Stsc181373g00001 575 PRINTS E-class P450 group I signature 529 552 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181373g00001 575 PRINTS E-class P450 group I signature 370 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181373g00001 575 PRINTS E-class P450 group I signature 390 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181373g00001 575 PRINTS E-class P450 group I signature 519 529 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181373g00001 575 Gene3D Cytochrome P450 94 574 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181373g00001 575 PRINTS P450 superfamily signature 529 540 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181373g00001 575 PRINTS P450 superfamily signature 520 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181373g00001 575 PRINTS P450 superfamily signature 381 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181373g00001 575 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181373g00001 Stsc-Chr181373 1001 3705 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181373g00001 92 575 Cytochrome P450 AT2G23180 45.306 3.70e-154 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181373g00001 - - aprc:113867564 671.389