Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181372g00001 ATGGGTTGGAAGAGATCTGATTTTGAGGACAAGAGAGTGATGAAGATCTATGGAGAAGTTTTATTGGGATTCTTGTTGATCTGCACACTTCAGTTTTCAAGTGCAGAAACTGATCCCACTGATGTTGCTGCAATTAATAGCTTACATGTTGCATTGGGGTCTCCTCCTATCCCCCTGTGGTCATCCAGTGGGGGAGATCCATGCGGACAAGGGTGGCAAGGAGTTCAATGCAATGGTACATTCATACAAAAAATAGTTCTGAATGCTGCAAATTTGCAAGGAGAACTTGGTGATAATCTGGGGAATTTTGTTTCCATCTCAGTAATTGATCTGAGCAACAACAATATTGGGGGAAGTATTCCATCCAATTTGCCAGTTACACTGAGAAACATTTTTCTTTCAGCCAACCAGTTCACTGGAAGTATTCCAGCCTCTTTATCTTCATTGACTGGACTGACAGACATGTCTCTTAACGATAATCATTTAAGCGGAGAAATACCAGATGCATTCCAGTCACTTCAGCTGTTGATCAACTTAGATTTATCTAGTAACAACTTGAGTGGGGAATTGCCTCCATCAATGGAGAATTTATCATCTGCAACTACACTACACTTGCAGAATAATCAACTTTCCGGGACTCTTGATGTTTTACAAGACCTTCCTCTTAAAGATTTGGATATTTCGAACAATCAGTTTAATGGTCCAATACCTCCGAAGTTGCTGAGCATTCCTAAGTTCAGTCAATCTGGCAACCCATTCAATGTTGTTAACTCTACTGCGCCGGCTACTTCTCCACCTCGTTCCCCAGTGGCAGCACCACCAGGAACACCAGTTCCTAAAACACCAGCTTCCGGAACACCATCTTCTGGAACACCGTCTTCTGGAACGCCATCTTCCGGACGTGGACCTCCCAAACAAGCTGATGGACCGACTGCAGCTAAGGAATCAAGTTCTGGGAAATCGAAAAAACACACCAAAAGGGTGGTTTGGATAGTTATTGCTAGCATATTGGGATTCATTATATTGTTACTAGCACTCCTTCTCTTTATGCCAAGATGTGCTAGAAGGGAACGGGCCGACAGAAGATCCAAGAGACATCAAATTGGTGCTATTGGAGGCGACAGACCACATTCTAGGAATCATGGGGCCTTGGTCGCACCGCCAAGTCAAACAGAGAAAGAGGATATTCGAAGGCCGAAAGAGGATCGCCATGTGGATACTAGGGCACTGGCTGCCATTCCGAAGACTCAAGATGAGCAAGATAAAAATATGCAAAGAATGACTTCAATAGACATGAGTACACTAGATGTCTATTCAATGCCTCCTCCCCCTCCGCCACCACCTCCCCCTCCACCACCACCTCCTCCCCCTCCGCCGCCGCCGCCTCCTCCTCCTCCTCCAACTACTGACAGGGTGGTTGTTGAACCGACCACAGTCCACAGAGGGACTAATGTCAATAAATCCCCAATACGTTCTCCAATACGTTCCCCAATACGTTCAGTTCCTCCTCCCACTTTTGCGAAATTTTTTAGCATTGCATCCCTTCAACAGTATACAAATAGCTTCTCTCAAGAAAATCTTATAGGAGGTGGCATGCTGGGCACTGTGTACAGGGCAGAGCTTCCTAATGGGAAGGTACTTGCTGTGAAGAAACTTGAAAAGAGAGTTTGCGATCAACAGAAGGAGGAGGATTTTCTTGAATTAGTGAATAGCATTGATAGAATACGACATGTAAATATCGTCGAGCTTATTGGGTACTGTTCGGAGCATGGTCAAAGGCTTCTGATATATGAATATTGCAGTAATGGATCACTCTATGAGGCACTCCACTCAGAGGAGGAATTTAAAACAAGACTCTCGTGGAATGCTCGCATCCGGATAGCACTTGGGACAGCTAGGGCCCTAGAGTATTTGCATGAGCTATGTCAGCCACCTGTGATTCACAGGAATTTCAAGTCTGCTAACATTCTTCTCGACGATGACCTATCAGTGCGTCTATCTGATTGTGGGTTGGCTCCATTAATAGCTTCAGGATCCGTCAGTCAGCTATCCGGACAACTGTTAACAGCTTATGGCTATGGAGCTCCGGAATTCGAATCAGGAGTTTACACATACCAGAGTGATGTGTACAGCTTCGGAGTAGTTATGTTGGAACTTTTGACCGGCCGTCAGTCCCATGACAGGACACGTCCGCGAGGGGAGCAGTTTCTGGTCAGATGGGCAGTTCCCCAACTCCATGATATTGATGCATTGTCAAGCATGGTTGATCCTTCTTTGAATGGAGACTATCCCACCAAATCATTATCAAATTTCGCAGATATTATTTCCCGATGCCTTCAGTCGGAGCCGGAATTTAGGCCTGCAATGTCAGAAGTCGTCTTGTACTTATTGAACATGATAAGGAAGGAGTCCCAGCAAAGTGAATCAGATGAAATATGA 2439 0.451 MGWKRSDFEDKRVMKIYGEVLLGFLLICTLQFSSAETDPTDVAAINSLHVALGSPPIPLWSSSGGDPCGQGWQGVQCNGTFIQKIVLNAANLQGELGDNLGNFVSISVIDLSNNNIGGSIPSNLPVTLRNIFLSANQFTGSIPASLSSLTGLTDMSLNDNHLSGEIPDAFQSLQLLINLDLSSNNLSGELPPSMENLSSATTLHLQNNQLSGTLDVLQDLPLKDLDISNNQFNGPIPPKLLSIPKFSQSGNPFNVVNSTAPATSPPRSPVAAPPGTPVPKTPASGTPSSGTPSSGTPSSGRGPPKQADGPTAAKESSSGKSKKHTKRVVWIVIASILGFIILLLALLLFMPRCARRERADRRSKRHQIGAIGGDRPHSRNHGALVAPPSQTEKEDIRRPKEDRHVDTRALAAIPKTQDEQDKNMQRMTSIDMSTLDVYSMPPPPPPPPPPPPPPPPPPPPPPPPPPPTTDRVVVEPTTVHRGTNVNKSPIRSPIRSPIRSVPPPTFAKFFSIASLQQYTNSFSQENLIGGGMLGTVYRAELPNGKVLAVKKLEKRVCDQQKEEDFLELVNSIDRIRHVNIVELIGYCSEHGQRLLIYEYCSNGSLYEALHSEEEFKTRLSWNARIRIALGTARALEYLHELCQPPVIHRNFKSANILLDDDLSVRLSDCGLAPLIASGSVSQLSGQLLTAYGYGAPEFESGVYTYQSDVYSFGVVMLELLTGRQSHDRTRPRGEQFLVRWAVPQLHDIDALSSMVDPSLNGDYPTKSLSNFADIISRCLQSEPEFRPAMSEVVLYLLNMIRKESQQSESDEI 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181372g00001 812 MobiDBLite consensus disorder prediction 438 471 - -
Stsc181372g00001 812 SUPERFAMILY Protein kinase-like (PK-like) 496 796 IPR011009 -
Stsc181372g00001 812 MobiDBLite consensus disorder prediction 357 372 - -
Stsc181372g00001 812 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 491 599 - -
Stsc181372g00001 812 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 807 IPR046959 -
Stsc181372g00001 812 MobiDBLite consensus disorder prediction 266 281 - -
Stsc181372g00001 812 Gene3D Phosphorylase Kinase; domain 1 496 599 - -
Stsc181372g00001 812 ProSiteProfiles Protein kinase domain profile. 522 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181372g00001 812 MobiDBLite consensus disorder prediction 479 493 - -
Stsc181372g00001 812 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 600 810 - -
Stsc181372g00001 812 MobiDBLite consensus disorder prediction 282 301 - -
Stsc181372g00001 812 MobiDBLite consensus disorder prediction 391 409 - -
Stsc181372g00001 812 SUPERFAMILY L domain-like 37 243 - -
Stsc181372g00001 812 PRINTS Proline rich extensin signature 280 292 - -
Stsc181372g00001 812 PRINTS Proline rich extensin signature 441 466 - -
Stsc181372g00001 812 PRINTS Proline rich extensin signature 292 313 - -
Stsc181372g00001 812 PRINTS Proline rich extensin signature 258 274 - -
Stsc181372g00001 812 Gene3D Ribonuclease Inhibitor 37 261 IPR032675 -
Stsc181372g00001 812 Pfam Protein tyrosine and serine/threonine kinase 525 794 IPR001245 GO:0004672|GO:0006468
Stsc181372g00001 812 MobiDBLite consensus disorder prediction 357 498 - -
Stsc181372g00001 812 Gene3D Transferase(Phosphotransferase) domain 1 600 812 - -
Stsc181372g00001 812 MobiDBLite consensus disorder prediction 254 324 - -
Stsc181372g00001 812 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 38 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181372g00001 Stsc-Chr181372 10187 16767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181372g00001 32 807 Strubbelig Receptor Gene Family AT4G03390 59.694 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Stsc181372g00001 PK_Tyr_Ser-Thr 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181372g00001 - - ahf:112737625 1328.54