Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181371g00002 ATGGGGTCAGTGCCTGTATTAGAAGAAGGGTCCATTATGAGAGAGCAAAGGGTGGTTCTTCATGTTGATGAAGAACAGAAAGAGAGGTTCAATTGGGTGCTGGATTCTCCAAATCCACCACCTCTTTGGAAGAAGCTACTTGGTTCAGTTAAAGAGGCTGTGTTGCCACGTCAACGTAGGAACACAACTTGGTCTTGTTTCTTGCAGAGTTTGTTTCCCATTCTTGGTTGGTTGAGAAATTACAAAGCCTCCAAGTTCAAAGATGATCTTTTAGCGGGTTTAACTCTTGCCAGCCTTAGCATACCTCAGAGTATTGGATATGCAAACTTAGCAAAAGTTGACCCTCAATATGGCCTATATACAAGTGTTGTTCCTCCTCTTATATATGCCATGATGGGGAGCTCAAGAGAAATTGCCATTGGACCAGTTGCAGTGGTATCCATGCTTCTAGCTACGTTGGTTCAGAAAGTGGAAGATCCTGTTGCTAATCCTATTGCCTATAGAAATTTTGTGTTCACTGTTACCTTCTTTGCCGGAATCTTTCAAGCCACATTCGGAATCTTCAGATTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCGTTAGTCGGATTCATGGCCGGCGCGGCCATCGTCATCGGGCTTCAGCAGCTAAAAGGGTTGCTTGGGATTACTCACTTTACCACCAAAACAGATGCAGTATCGGTGTTGGTATCGGTTTATAAATCGCTACATTATCAAATTACTTCTGGGGAAAATTGGTGTCCTCTTAATTTTGTGCTGGGGTGCTCATTCCTTATTTTCATTCTGATTACACGGTTTATTGGAAGAAGAAACAGGAAGTTATTCTGGTTGCCTGCAGTTTCTCCTCTTCTGTCAGTTATACTTTCAACACTAATTGTATATTTGTCAAAAGCTGATAAACAAGGAGTTAACATAATAAAGCATGTCAAAGGAGGCCTTAATCCAAGTTCACTTCACCAGTTACAATTTCATGGTCAAAATGTTGGGGAAGCTGCTAAAATTGGATTAATTTGTGCCATCATAGCACTCACTGAAGCAGTAGCTGTTGGTCGATCTTTTGCTTCGGTTAAGGGATATCACCTTGATGGGAACAAAGAAATGTTATCAATGGGGGTCATGAACATTGCAGGATCTTTAACCTCTTGCTATGTAGCCACTGGTTCATTCTCGAGAACAGCAGTAAACTTCAGTGCAGGATGCCAAACAGCAATATCAAATATTGTGATGGCAATAACCGTGTTTGTGTGCTTACAACTGTTTACAAGGCTGTTATACTACACCCCTGTGGCAATACTTGCTTCTATCATACTCTCTGCACTCCCTGGTTTAATTGACATATCCGAGGCTTTCTATATCTGGAAGGTGGACAAGTTTGACTTTCTTGCTTCTCTTGGTGCTTTCCTTGGTGTCTTGTTTGCTTCAGTAGAGATTGGTCTTCTTGTTGCAGTAACAATCTCATTTGCAAAGATACTAATACAATCAATTAGACCAGGGGTAGAAGTTCTAGGGAGAGTTCCAAGCACTGAAGCCTTTTGTGATGTAACTCAATACCCTATGGCCATAAGCACCCCTGGAATCATAGTCATTCGCATCAGCTCTGGCTCTTTCTGCTTTGCAAATGCTAATTTTGTCAGAGAAAGAATTTTGAAGTGGGTCACGGAAGATAATGAGTTTAAAGAAAATGCCAAGGGAAAGGTCAAAGCAGTGATCCTCGACATGGCAAATCTAATGAATGTTGATACTTCCGGAATTCTGGCATTGGAGGAGCTACACAAGAGATTGCAATCACGTGGCATTGAATTAGCTATGGTGAACCCAAGGTGGCTAGTAATTCATAAACTGAAACTTGCACACTTTGTGGACAAAATCGGAAAGGAATGGATCTTCCTCACTGTTGGAGAAGCCGTGGATGCATGTCTCAATTATAAATTTTCTAGTGCTTGA 1968 0.4151 MGSVPVLEEGSIMREQRVVLHVDEEQKERFNWVLDSPNPPPLWKKLLGSVKEAVLPRQRRNTTWSCFLQSLFPILGWLRNYKASKFKDDLLAGLTLASLSIPQSIGYANLAKVDPQYGLYTSVVPPLIYAMMGSSREIAIGPVAVVSMLLATLVQKVEDPVANPIAYRNFVFTVTFFAGIFQATFGIFRLGFLVDFLSHAALVGFMAGAAIVIGLQQLKGLLGITHFTTKTDAVSVLVSVYKSLHYQITSGENWCPLNFVLGCSFLIFILITRFIGRRNRKLFWLPAVSPLLSVILSTLIVYLSKADKQGVNIIKHVKGGLNPSSLHQLQFHGQNVGEAAKIGLICAIIALTEAVAVGRSFASVKGYHLDGNKEMLSMGVMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAISNIVMAITVFVCLQLFTRLLYYTPVAILASIILSALPGLIDISEAFYIWKVDKFDFLASLGAFLGVLFASVEIGLLVAVTISFAKILIQSIRPGVEVLGRVPSTEAFCDVTQYPMAISTPGIIVIRISSGSFCFANANFVRERILKWVTEDNEFKENAKGKVKAVILDMANLMNVDTSGILALEELHKRLQSRGIELAMVNPRWLVIHKLKLAHFVDKIGKEWIFLTVGEAVDACLNYKFSSA 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181371g00002 655 NCBIfam sulfate permease 73 643 IPR001902 GO:0016020|GO:0055085
Stsc181371g00002 655 ProSitePatterns SLC26A transporters signature. 115 136 IPR018045 GO:0008271|GO:0008272
Stsc181371g00002 655 CDD STAS_SulP_like_sulfate_transporter 525 640 - -
Stsc181371g00002 655 FunFam Sulfate transporter 31 504 650 - -
Stsc181371g00002 655 PANTHER SULFATE TRANSPORTER 62 647 IPR001902 GO:0016020|GO:0055085
Stsc181371g00002 655 SUPERFAMILY SpoIIaa-like 531 647 IPR036513 -
Stsc181371g00002 655 Pfam STAS domain 525 643 IPR002645 -
Stsc181371g00002 655 Gene3D STAS domain 504 650 IPR036513 -
Stsc181371g00002 655 Pfam Sulfate permease family 86 471 IPR011547 GO:0016020
Stsc181371g00002 655 ProSiteProfiles STAS domain profile. 541 647 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181371g00002 Stsc-Chr181371 27059 36635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181371g00002 24 651 Inorganic Solute Cotransporters AT5G10180 63.594 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181371g00002 K17469 - gmx:100776591 1058.13