Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181367g00005 ATGGAATTGCCAAACGGTGGCGTCATCACCAAAACAGAGTCACAAAGCAAAGAAAGACTTGCAATTTTCGAACTGGCACACATGATTAGTGTTCCTATGTCACTGGTCGCCATAATCAAACTGAAAGTGCCACAAACCATTTGGCAACAAGGTACCAACACTCCTCTCTCCGCTTCGGAAATTATCGCACGTGTGCGTCCCCACGGTAGTAGTGCTGCTGATCCACACAATCTTCAACGCATGCTTCGCTTGCTCACAAGCTATAACATCTTTGCTGAGCATCTCAACGAAAATAACGGTGAGAGGAAGTTTAGCCTAACCGACATTGGCAAAACTCTTGTAGATGATGATGAAGGTTTATCTTATGCCTATTACATGCTCCAGCATCACGAGGACGCATTGATAAATACTTGGCCATTCGTGGCGGAGGCAGTGGAGGATCCAACGACGGTGCCATTCAAGAAGGCAAACGGCGACGGAGCGATGAGCTACTACTCGAAGCGGCCAAATATGATTAACTTGTTCGGCAAGGCCATGCGTAGTGTGTCCGTACCATTCATGAGGGAAATGCTAGAGTCCTATGATGGCTTCAATGGTATTGAATCATTGGTTGATGTTGGTGGCAACTATGGTGACTGTTTGGAAATGATAATGCAAAGGTACCCTAATATCCGTAAGGGTATCAACTTTGATTTGCCTCATGTCGTTGCTCATGCACCACCTCTTCCAGGAATAATTCATGTAGGTGGTGACGCCCATGAATTTGTTCCCAATGGAGATGCTATATTCTTAAAGTGGCTAGTTACAACATCGACGGACGAGGATACCAAGAAGTTGTTTGAGAATTGTTACAAGGCACTTCCAAAGGGAGGGAAATTGATTGTTGTTGAGCCAGTGCTGCCAGAGTCAACGGACGAAAGTCAAAGAACAAGGACATTGCTCGGTGCTGACGTGTACAACATGACAATGTACAACCCTAAAGGGAAGCAGAGAACCGAACAACAATTCAAAGATCTTGCTAATTTTGCTGGCTTCTCTTCTTGCCGTGCCTTCTATGTTGATCCTTTCATGTCTGTTCTTGAGTTTCAGAAATGA 1095 0.4502 MELPNGGVITKTESQSKERLAIFELAHMISVPMSLVAIIKLKVPQTIWQQGTNTPLSASEIIARVRPHGSSAADPHNLQRMLRLLTSYNIFAEHLNENNGERKFSLTDIGKTLVDDDEGLSYAYYMLQHHEDALINTWPFVAEAVEDPTTVPFKKANGDGAMSYYSKRPNMINLFGKAMRSVSVPFMREMLESYDGFNGIESLVDVGGNYGDCLEMIMQRYPNIRKGINFDLPHVVAHAPPLPGIIHVGGDAHEFVPNGDAIFLKWLVTTSTDEDTKKLFENCYKALPKGGKLIVVEPVLPESTDESQRTRTLLGADVYNMTMYNPKGKQRTEQQFKDLANFAGFSSCRAFYVDPFMSVLEFQK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181367g00005 364 SUPERFAMILY "Winged helix" DNA-binding domain 17 117 IPR036390 -
Stsc181367g00005 364 Pfam O-methyltransferase domain 141 346 IPR001077 GO:0008171
Stsc181367g00005 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 364 IPR016461 GO:0008168
Stsc181367g00005 364 Pfam Dimerisation domain 33 86 IPR012967 GO:0046983
Stsc181367g00005 364 Gene3D - 6 113 IPR036388 -
Stsc181367g00005 364 PIRSF O-mtase 2 364 IPR016461 GO:0008168
Stsc181367g00005 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 362 IPR029063 -
Stsc181367g00005 364 Gene3D Vaccinia Virus protein VP39 114 364 IPR029063 -
Stsc181367g00005 364 PANTHER O-METHYLTRANSFERASE 25 351 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181367g00005 Stsc-Chr181367 21964 26189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181367g00005 12 364 Monolignol Biosynthesis Gene Families AT3G53140 56.901 6.25e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181367g00005 - - ccaj:109819366 449.514