Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181363g00009 ATGGCTGAAATTGCTTCTGGTGCGGCGGCAACACTCTTGTCCAATCTAGCAACAAAATCATTCCAAGAGATTGCTCTAGCATGTGGTCTTGAAGAGAATGTGAAAAAGCTTCAGAGTTCTTTGAGAATCACCAATGGATATCTCTTAGATGCTGAGAACAAGCAAGCAAAAAACCACAGTATAACTGAGTGGTTGAAGCAACTAAGAGAGGCATTTGATGATGCTGGAGACATATTAGACGAAATAGAATACGAGGCAAAACATAATGAAGTGGTCAAAATTTATGGAAGCATCAGCACCAAGGTATACCGATTCTTTTCATACACAAGTAATCCACTCGCTTTTCGCATCAGAATGGCTCATAAAATCAAAGATATGAAACAACGGATAGATGAAAAAGTAAGAGAAGGGAGAATCTTGGGTATTGTGGAACAACATGTCAACACTCCAACACTGGAACACAGTTTACAATGGCGAGAAACTAGTTCTTCGTTGCCCTTACGTGTGTGTGGTAGACATGAAGAAAAAGAGGATATCATACAGTTATTAATGGGACAACATTCAGAGGCTAGTAATGTTGATGTGATATCTATTGTTGGGATCGGAGGTTTGGGGAAGACTACTCTTGCTCAAATGGTTTATGATGATGACAGAGTGAAGCAGCATTTTAATATGTTAATGTGGGTGTGTGTCTCTGATGATTTTGATATGAAAAGGTTAATACAAAGAATTATTCATGCTGCATCAAAGCCAGAGAATATAGTTAACTTTGACGCAAATTCTAGTTTGGAAGATATGGTCTCTCTTCTCAATAAAAAGCTATGTGATAAGAAGTTCATACTTGTGTTAGACGATGTTTGGAATGAACACCACAACAAATGGGATGAATTCAGAAATCACTTGTTGAAGGCAGGAAGTGGCCAAAAATCAAAAGGGAGTAAAATTATAGTGACCACACGTAGCCACAAAGTTGCTGATATTGTTGGAGGTGGTCTTCTAATTAATTTAAAAGCACTTCCTGAGAACGAATGTTGGAAATTGTTCGTGAAATGTGCATTCCAAGAAGAGGGGGACGAAGAAAAGTACCCAAGACTAAAGCAAATTGGGGTGGAAATTGTTAGAAAATGCAAAGGGGTGCCCTTAGCTATAACAACTTTGGGTTGCTTGCTTAGATCAAAATCCCATGATGAAAATGAGTGGAGAAAAATACGTGACAGCGAGGTGTGGAAACTTGATCCAGAAGAAATTGGCATTTTACCATCATTGAGATTGAGTTATGATCACTTGTCACCGGAAGTAAAGCAATGTTTTTCGTACTGCTCATGTTTTCCAAAGGATTATGAATTTGAGGTTATTGAGTTGATTATGTTCTGGACAGCTCATGGACTCCTCCAACCTATTCATGAAGAGGAAGATGTAGAAGATATTGGGGAGTTGTATATTGAGAAGCTTCTTTCCTTATGTTTGCTTCAAATTGATGAAGAATATTTTCCTGATTCGTTGTTGCTTATAAGACTCAAAATGCATGATCTTGTACATGATCTTGCAAAATCAACAATGAAAATGTCAAGCAAGACAAGAACCATTGTCCAAGGGGAAGTGCAGGAAGGGGAACAAGAAACATCTACAGAATGTGACTCCAACAAATTCAACTATGTGAAGGCGTTGCACTTAAGATATATGGAATCGAGCTCGTTGCCTGATGATTGTTTTGAGACAATGAAGAAGCACTTGAGATATCTCAATCTAAAACATTCTCCTATTTTGGAAAAACTCCCTGATTCAATTTGCAAGCTACAAAATTTGCAGAGTTTGAACCTTCACGGTTATAACAACATCCATACCCTTCCAAAAAACATGAAGTACCTCATTAGCCTTCAGTATTTGTTTTTGACGGTCAAAGCTACAAGTTTATCCTCGATGAACATAGGATGCTTCCAACAACTCAAATTCTTATATCTTGATGATTGTTCAAAGTTAGTGTCTATGCCAAGTGCTGTTGGTCGCTTGACTACTTTAAATACGTTGATGATTCATTTCTGTTCTAATTTGGTGAGCTTTGAGGATGAAGAGGAAGAAGGAAAGGAACATGTGACAGCAGTTCATAATTTAAACCTTCAATTATTTGATATCAAGGGATTATACAAGTTGAAAGCTTTACCAAATTGGCTTGAAAGAGCTACTAAATTGCGATATTTGACCATAATAGGAGCAATTATTAAATCATTTCCCGCAAGATTGCCAATGGCCTCTCTTGAACAACTTGATATCAATGATTGTGCAGAATTATCATCTCTTCCAGACAACATGGATCAAACTCATAGTCTGCAGTATTTGAAGATATATGATTGTCCTACACTAAGCCAAAGGTATAATAAGAGGACAGGCTCGGATTGGAGTAAAATTGCTCATATCCCACGTTGTGAGATTAATGGGTATGACCAACATGATGATTGA 2457 0.3757 MAEIASGAAATLLSNLATKSFQEIALACGLEENVKKLQSSLRITNGYLLDAENKQAKNHSITEWLKQLREAFDDAGDILDEIEYEAKHNEVVKIYGSISTKVYRFFSYTSNPLAFRIRMAHKIKDMKQRIDEKVREGRILGIVEQHVNTPTLEHSLQWRETSSSLPLRVCGRHEEKEDIIQLLMGQHSEASNVDVISIVGIGGLGKTTLAQMVYDDDRVKQHFNMLMWVCVSDDFDMKRLIQRIIHAASKPENIVNFDANSSLEDMVSLLNKKLCDKKFILVLDDVWNEHHNKWDEFRNHLLKAGSGQKSKGSKIIVTTRSHKVADIVGGGLLINLKALPENECWKLFVKCAFQEEGDEEKYPRLKQIGVEIVRKCKGVPLAITTLGCLLRSKSHDENEWRKIRDSEVWKLDPEEIGILPSLRLSYDHLSPEVKQCFSYCSCFPKDYEFEVIELIMFWTAHGLLQPIHEEEDVEDIGELYIEKLLSLCLLQIDEEYFPDSLLLIRLKMHDLVHDLAKSTMKMSSKTRTIVQGEVQEGEQETSTECDSNKFNYVKALHLRYMESSSLPDDCFETMKKHLRYLNLKHSPILEKLPDSICKLQNLQSLNLHGYNNIHTLPKNMKYLISLQYLFLTVKATSLSSMNIGCFQQLKFLYLDDCSKLVSMPSAVGRLTTLNTLMIHFCSNLVSFEDEEEEGKEHVTAVHNLNLQLFDIKGLYKLKALPNWLERATKLRYLTIIGAIIKSFPARLPMASLEQLDINDCAELSSLPDNMDQTHSLQYLKIYDCPTLSQRYNKRTGSDWSKIAHIPRCEINGYDQHDD 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181363g00009 818 Gene3D - 8 129 - -
Stsc181363g00009 818 Gene3D - 154 329 IPR027417 -
Stsc181363g00009 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 440 IPR027417 -
Stsc181363g00009 818 Pfam Rx N-terminal domain 10 90 IPR041118 -
Stsc181363g00009 818 PRINTS Disease resistance protein signature 273 287 - -
Stsc181363g00009 818 PRINTS Disease resistance protein signature 747 763 - -
Stsc181363g00009 818 PRINTS Disease resistance protein signature 376 390 - -
Stsc181363g00009 818 PRINTS Disease resistance protein signature 195 210 - -
Stsc181363g00009 818 PANTHER DISEASE RESISTANCE PROTEIN RP 60 781 IPR044974 GO:0006952
Stsc181363g00009 818 Pfam NB-ARC domain 175 405 IPR002182 GO:0043531
Stsc181363g00009 818 FunFam Probable disease resistance protein At1g61300 155 330 - -
Stsc181363g00009 818 FunFam Probable disease resistance protein At1g63360 426 518 - -
Stsc181363g00009 818 Gene3D - 338 425 IPR042197 -
Stsc181363g00009 818 SUPERFAMILY L domain-like 495 787 - -
Stsc181363g00009 818 Gene3D Ribonuclease Inhibitor 516 803 IPR032675 -
Stsc181363g00009 818 Gene3D - 426 515 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181363g00009 Stsc-Chr181363 84938 88714 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181363g00009 192 787 WRKY Transcription Factor Family AT5G45050 22.883 8.18e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181363g00009 - - adu:107472938 1122.07