Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181363g00006 ATGGCTGAAGTTGTTTCTAGTGTGGCGAGAACACTCTTGGCTAATCTAGCAACAAGTTCATTTCAAGAGATTGTTCTGGCATGTGGTCTTAACGATGATGTAAAAGACCTTCAAAGTTCTTTGAAAATCATCAGTGCATATCTCTTAGATGCCGAAAACAAGCAAGCAAAGAATCACAGTGTAGCTGAGTGGTTGAAGCAACTCAGAGAGGCATTCGATGATGCTGGTGACATATTAGACGAAATAGAGTACGAGGCAAACCATAATGAGGTGGTTAAAATGTATGGAAGCATTAGCACCAAGGTAAAACGATTCTTCTCATATAAAAGTAATCCGCTCACATTTCGTATCAGGATGGTTCATAAGATCAGAGATATGAAACAAAAGATAGATGAAAAAACAAAAGAAGGGAGAAACATGGGTATAGTTGAACAACATGTCAACACACCAACTCTAGAGCACAATTTACCATGGCGAGAAACTAGTTCTTCGTTGCCCTTACGCGTGTGTGGTAGACATCAAGAGAAAGAGAAGATTATAAAGTTATTAATGGGACAACAATCAGAGGCTAATAACGTTGATGTGATATCGATTGTTGGGATCGGAGGTTTGGGGAAGACTACACTTGCTCAAATGGTTTATGATGATGATAGAGTGAAGCAGCATTTTAATATGCTGATGTGGGTGTGTGTCTCTGATGATTTTGATGTGAAGATGTTAATACAAAAGATCATTCATGCTGCCTCAAGGACAGAGAATGTAGTTAATGCAAATTCTAGTTTGGAACATATGGTATCTCTTCTAAACGAAAAGTTATGTGGTAAGAAGTTCTTTCTTGTGTTAGACGATATTTGGAATGAAAATCACAACAAATGGGATGAATTCAGAAATCACTTGTTTAAGGCAAGTAGTGACAGAGAATCAAAAGGGAGCAAAATCATAGTGACTACACGTAGCCACAAAGTTGCTGATATCGTTGGAGGCGGTCTTATAATCAATTTAGAGGCACTTCCTGAGGATGAATGCTGGAAATTGTTTCTCAAATGTGCATTCCAAGAAGAGAGGGAAGAAGATAAGTACCCAAGGCTTAAGCAAATTGGGGTGGAAATTGTTAAAAAATGCAAAGGGTTGCCCTTAGCTATAACAACTTTGGGTTGCTTTCTTAGATCGAAATCCCATGATGAAAATGAGTGGAGAAAAATAAGTGATAGTGAGGTGTGGGAACTTGATCAAGAAGAAGCCGACATTTTGCCATCTTTGAGATTGAGTTATAATCACTTGCCACCAGAAGTGAAGCAATGCTTTTCATATTGTTCTTATTTTCCAAAGGATTATAATTATCAAGCTATTGAGTTGATTATGTTTTGGATGGCTCATGGACTCCTCCAACCCACAAGTGAAGAGGAAGATGCAGAAGATATCGGAGAATTGTATATTAAGAAGCTCGTTTCAACGTCTTTGCTTCAACTTTTTGGTCTTCCCTTCATGAATTTCACAAATTCAATCACATTTAAGTTTTTCAAAATGCATGATCTTGTACACGATCTTGCAAAATCAACAATGAAGGAATCCAACAAGACTAGGACCATTGTGCAAATGGGGCAACAAGAAGCATCTATGGAATGGTTCTCCAACAAGAAGTTCGACTATCTAAAGGTGTTGCACTTAGAAAAAGATATGGAATTGACATCGTTGTCTGATGATTGCTTTGCGCCAATGAAGAAGCACTTGAGATACCTCCATCTAGAAAATCATTCTTTGCAAAATCTCCCTGATTCCTTTTTTAAGTTGCAATATTTGCAAATCTTGAAACTTTTTGGTTTTCGCCTCCAAGAGCTTCCCAATGACATGATAAATCTTATCAACCTTCAATACTTGTTTTTGAAGGTCGAGGCTAAAAGTTTGTCCTCAATGAATATAGGACACTTCCAACAACTCAAATTCTTATATCTTGGGTGGTGTTCCGAATTAGTGTCTATACCAAGTGTTGTTGGTTGCATGACTACTCTAAAGAAGCTAAAGATTCATTTTTGTAGCAATCTGGTGAATTTTAAAGATGGAGAAGAAGGAGGAAAGCAACATAATTCAAATCTTCAGCTATTTGAGATTTCTTGTTCAAGCAAATTGAAAGCTTTACCTAAGTGGCTTGAAAGAGCTACTAAATTGAGATATTTGAAAATAGAAGACACAAGGGTAAAATCATTGCCCACAAGATTGCCAATAGCTTCTCTTGAAGAACTTCATATCATTAAGTGTAAAGAATTGTCATTTCTTCCCAACAACATTGATCAAGCTCATCATCTTCAGTATTTGGAGATACTTCGTTGTCCCACACTAAGTGCAAGGTACAAAAGGAGTAGAGGTCCAGATTGGCCCAAAATTGCTCATATCCCACATTGCAAGATTGATTTGGACGACCAAAATAGCATATCGAGATATGGAGTGAATAAAATATAG 2457 0.3728 MAEVVSSVARTLLANLATSSFQEIVLACGLNDDVKDLQSSLKIISAYLLDAENKQAKNHSVAEWLKQLREAFDDAGDILDEIEYEANHNEVVKMYGSISTKVKRFFSYKSNPLTFRIRMVHKIRDMKQKIDEKTKEGRNMGIVEQHVNTPTLEHNLPWRETSSSLPLRVCGRHQEKEKIIKLLMGQQSEANNVDVISIVGIGGLGKTTLAQMVYDDDRVKQHFNMLMWVCVSDDFDVKMLIQKIIHAASRTENVVNANSSLEHMVSLLNEKLCGKKFFLVLDDIWNENHNKWDEFRNHLFKASSDRESKGSKIIVTTRSHKVADIVGGGLIINLEALPEDECWKLFLKCAFQEEREEDKYPRLKQIGVEIVKKCKGLPLAITTLGCFLRSKSHDENEWRKISDSEVWELDQEEADILPSLRLSYNHLPPEVKQCFSYCSYFPKDYNYQAIELIMFWMAHGLLQPTSEEEDAEDIGELYIKKLVSTSLLQLFGLPFMNFTNSITFKFFKMHDLVHDLAKSTMKESNKTRTIVQMGQQEASMEWFSNKKFDYLKVLHLEKDMELTSLSDDCFAPMKKHLRYLHLENHSLQNLPDSFFKLQYLQILKLFGFRLQELPNDMINLINLQYLFLKVEAKSLSSMNIGHFQQLKFLYLGWCSELVSIPSVVGCMTTLKKLKIHFCSNLVNFKDGEEGGKQHNSNLQLFEISCSSKLKALPKWLERATKLRYLKIEDTRVKSLPTRLPIASLEELHIIKCKELSFLPNNIDQAHHLQYLEILRCPTLSARYKRSRGPDWPKIAHIPHCKIDLDDQNSISRYGVNKI 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181363g00006 818 Gene3D Ribonuclease Inhibitor 690 785 IPR032675 -
Stsc181363g00006 818 Gene3D Ribonuclease Inhibitor 518 689 IPR032675 -
Stsc181363g00006 818 Pfam Rx N-terminal domain 10 99 IPR041118 -
Stsc181363g00006 818 PRINTS Disease resistance protein signature 641 657 - -
Stsc181363g00006 818 PRINTS Disease resistance protein signature 271 285 - -
Stsc181363g00006 818 PRINTS Disease resistance protein signature 195 210 - -
Stsc181363g00006 818 PRINTS Disease resistance protein signature 374 388 - -
Stsc181363g00006 818 Gene3D - 424 517 IPR036388 -
Stsc181363g00006 818 Gene3D - 336 423 IPR042197 -
Stsc181363g00006 818 Gene3D - 6 124 - -
Stsc181363g00006 818 FunFam Probable disease resistance protein At1g61300 156 328 - -
Stsc181363g00006 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 438 IPR027417 -
Stsc181363g00006 818 Gene3D - 156 327 IPR027417 -
Stsc181363g00006 818 Pfam NB-ARC domain 173 404 IPR002182 GO:0043531
Stsc181363g00006 818 FunFam Probable disease resistance protein At1g63360 424 519 - -
Stsc181363g00006 818 PANTHER DISEASE RESISTANCE PROTEIN RP 62 775 IPR044974 GO:0006952
Stsc181363g00006 818 SUPERFAMILY L domain-like 508 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181363g00006 Stsc-Chr181363 60614 63421 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181363g00006 192 766 WRKY Transcription Factor Family AT5G45050 22.995 1.12e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181363g00006 - - adu:107472938 1139.02