Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181363g00005 ATGGAAGAAGCTAGTATTGTTGGTGAATTAATGCAAGGAAAGGAGTTTGCAAAGAAGCTCTTTGATCATTTCAATTCATCATCATCACCATCATCATCAACTTCATCATCATCATCATCACATGAATCTAATGAAGCTTTGATAGAGAAGATACTTTCAACCTATGAGAAAGCACTCACCATGCTCAATAACACCAACATCATGATGAAGGATTCTTCTCATTGTTCATCTTCTTCTCTTGCAAATGGTACCACAAAAAATGAGGTCTTGGAAAAAGAGGTAGTTGCTCCAAAGAACAAAGAAGTGTCCAAGAAAAGAAAAACTATGTCAATGTGGACAAAGCAAGTGAAGGTGTGTTTGGGAACAACAGCGATTGATGGTTCTATGGAAGATGGCCATAGCTGGAGAAAATATGGACAGAAAGATATTCTTGGAGCTAAGTTTCCAAGAGGATATTACAGATGCACACATAGACATGTACAAGGTTGTTTGGCCACAAAACAAGTTCAAAAATCAGATGAAGATCCAAATGTGTTAGAAATAACCTACAAAGGAAGACACACTTGCATTCATCAAGTTAATAATCATCTCTCAAAAAGAGCAACAACAACAAATTCAAAACCAAGCATGCCCTTATTATTAGATCATCATCATCCACAACAAGAAGAGATCAAAACAGAACAACCCCATGAAACAATTCTCACATTTGGATCATCACCTTCCTCATCATCATCACAAGAACTTGAAATCAAAATTGATGACTTTGACTTTGACTTTGACCTTGGCACAAAGGAGAGCATTTTCTCTTCACTTTACTTCACTTCTCCATCAATAGTTTCTGAAATTGAAAGCTTCTCTCCTGAATTCATATCACCAACAACAAATTCAGAATCAAACAGCATTTTCCACTTTCAAACCTCAGATTCTGAATTTAGTGATAATGTTTCAGCACCAACTTCAGTCTCCAATTCACCAATAATAGCAGGCTTGGATTTTCACTCCTTTGATGATAAGGTGGACTTTGATAACTATTTCTCCATGAGCTCCTAG 1050 0.3648 MEEASIVGELMQGKEFAKKLFDHFNSSSSPSSSTSSSSSSHESNEALIEKILSTYEKALTMLNNTNIMMKDSSHCSSSSLANGTTKNEVLEKEVVAPKNKEVSKKRKTMSMWTKQVKVCLGTTAIDGSMEDGHSWRKYGQKDILGAKFPRGYYRCTHRHVQGCLATKQVQKSDEDPNVLEITYKGRHTCIHQVNNHLSKRATTTNSKPSMPLLLDHHHPQQEEIKTEQPHETILTFGSSPSSSSSQELEIKIDDFDFDFDLGTKESIFSSLYFTSPSIVSEIESFSPEFISPTTNSESNSIFHFQTSDSEFSDNVSAPTSVSNSPIIAGLDFHSFDDKVDFDNYFSMSS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181363g00005 349 Gene3D WRKY domain 101 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc181363g00005 349 ProSiteProfiles WRKY domain profile. 124 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181363g00005 349 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 299 IPR044810 GO:0003700
Stsc181363g00005 349 FunFam WRKY transcription factor 53 114 192 - -
Stsc181363g00005 349 SMART WRKY_cls 129 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181363g00005 349 Pfam WRKY DNA -binding domain 130 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181363g00005 349 SUPERFAMILY WRKY DNA-binding domain 128 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181363g00005 Stsc-Chr181363 55928 58867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181363g00005 1 341 WRKY Transcription Factor Family AT2G46400 34.006 8.81e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc181363g00005 WRKY 2.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181363g00005 - - gmx:100170747 292.737