Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181362g00015 ATGGAAGGAGGAGTAGTTGGAGAGAGAGGAAGTAGTAGTAGCAATGATCCCATTATTATTCCCAATAATAATAATAATAATAATAATTATGATCTCCAAATCTCATTCACAAACTCAATGGGTTTTCTTCATCATCACTTTGAAGATCACAATCAGCAGGTTCTTGGCTTTTTGACACCTTCTTCTCTTCTTCCTCAACAATCTCAATCTTCCCAAATTTCTCATCACCCTCTAAATGATGGTGGTTGCGGAGGCGGTAATAACAGTAGTATAAATAATACAAGTGTTACCGTCGCTGCAACCACCATAACCGCAAGCGCAACCGCAATCGCAACCACAGTTGGGTTCAGCCATGATGAACTTGTTCCAAGAACTCCTTGGAATAATAATGAAGACCAGGTTAGAAGTATGGATCCGAAAGGTATGAATAATAACAATAATAATGATGATGAAAATTGCAATGGAAATACAAGTGATGGAAACAACTCATCATGGTGGAGGAATGGAGGAACATCAGAGAAGGGGAAGGTGAAAGTGAGGAGGAAGCTGAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGTGATGTTGATGTTCTTGATGATGGTTACAAATGGAGGAAGTATGGCCAGAAAGTTGTTAAGAATAGCCTTCATCCAAGAAGCTACTATCGTTGCACACATAACAATTGTAGAGTGAAGAAAAGAGTTGAAAGGCTTTCTGAAGATTGTCGAATGGTTATTACAACTTATGAAGGAAGACACAATCACTCTCCATGCGATGATTCTAATTCATCTGAACATGAATGCTTCACCTCTTTTTGA 822 0.3856 MEGGVVGERGSSSSNDPIIIPNNNNNNNNYDLQISFTNSMGFLHHHFEDHNQQVLGFLTPSSLLPQQSQSSQISHHPLNDGGCGGGNNSSINNTSVTVAATTITASATAIATTVGFSHDELVPRTPWNNNEDQVRSMDPKGMNNNNNNDDENCNGNTSDGNNSSWWRNGGTSEKGKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181362g00015 273 MobiDBLite consensus disorder prediction 122 173 - -
Stsc181362g00015 273 ProSiteProfiles WRKY domain profile. 194 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181362g00015 273 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 102 260 IPR044810 GO:0003700
Stsc181362g00015 273 Pfam WRKY DNA -binding domain 200 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181362g00015 273 Gene3D WRKY domain 185 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc181362g00015 273 SUPERFAMILY WRKY DNA-binding domain 191 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc181362g00015 273 MobiDBLite consensus disorder prediction 1 23 - -
Stsc181362g00015 273 SMART WRKY_cls 199 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181362g00015 273 MobiDBLite consensus disorder prediction 123 170 - -
Stsc181362g00015 273 FunFam WRKY transcription factor 57 185 259 - -
Stsc181362g00015 273 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181362g00015 Stsc-Chr181362 96137 100981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181362g00015 147 273 WRKY Transcription Factor Family AT2G44745 77.692 8.09e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc181362g00015 WRKY 2.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181362g00015 - - adu:107464355 360.918