Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181361g00018 ATGGTAGATCATCCTAATCTTGTCAAGTCAATTGGGTATTGTGCTGAGGGAGATCAGAGGCTACTGGTTTATGAGTACATGCCATTGGGATCTTTGGAGAACCATTTACATGATCTTCCACCGGGGAAAAGACCTATAAGTTGGAATACAAGGATGAAAATCGCGGCTGGTGCAGCCAAGGGGTTGGAGTATTTGCATGATAAAATGAAGCCTCCTGTAATTTACCGTGATCTGAAATGCTCAAACATTTTGTTAGACGAGAAATACCATGCCAAATTGTCTGATTTCGGGTTGGCGAAAGTAGTCCCGAGTGGCGATAAGTCTCATGTTTCGACGAGGGTTATGGGCACTTATGGTTACTGTGCTCCAGATTATGCAATGACTGGTCAGTTGACATTCAAGTCTGATATTTACAGCTTTGGTGTTGTTCTTTTGGAGCTCATCACAGGAAGGAAAGTCATAGACCACAGAAGACCTGAAAAGGAAGAAAATCTAGTTGCATGGGCAAGGCCATTATTCAAAGACCGGAAAAGATTCTCAGAGATGGTTGATCCATTGCTTGAAGGTAAATATCCAGTGAGAGGCTTATACCAAGCACTCGCCATTGCGGCGATGTGTCTACAAGAGCAGCCTAACATGCGGCCTGCCACAGCGGATGTGGTTACAGCTCTAGATTTCCTTGCTTCACAGAAATATGATCCTCAATCAACTACTCCAAACTCAAAAAGTCCATCAGTTTCTCCAATAATTCAGAAAACAGATGACAATTGA 771 0.4306 MVDHPNLVKSIGYCAEGDQRLLVYEYMPLGSLENHLHDLPPGKRPISWNTRMKIAAGAAKGLEYLHDKMKPPVIYRDLKCSNILLDEKYHAKLSDFGLAKVVPSGDKSHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKVIDHRRPEKEENLVAWARPLFKDRKRFSEMVDPLLEGKYPVRGLYQALAIAAMCLQEQPNMRPATADVVTALDFLASQKYDPQSTTPNSKSPSVSPIIQKTDDN 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181361g00018 256 SMART serkin_6 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181361g00018 256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 73 85 IPR008271 GO:0004672|GO:0006468
Stsc181361g00018 256 Pfam Protein kinase domain 2 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181361g00018 256 SUPERFAMILY Protein kinase-like (PK-like) 2 240 IPR011009 -
Stsc181361g00018 256 MobiDBLite consensus disorder prediction 232 256 - -
Stsc181361g00018 256 Gene3D Transferase(Phosphotransferase) domain 1 28 246 - -
Stsc181361g00018 256 PANTHER OS07G0668900 PROTEIN 2 236 - -
Stsc181361g00018 256 PIRSF ILK 1 236 - -
Stsc181361g00018 256 FunFam Serine/threonine-protein kinase PBS1 27 242 - -
Stsc181361g00018 256 Gene3D Phosphorylase Kinase; domain 1 1 27 - -
Stsc181361g00018 256 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181361g00018 Stsc-Chr181361 86179 87972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181361g00018 1 229 Glycoside Hydrolase AT3G07070 67.249 1.87e-113 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Stsc181361g00018 Pkinase 5.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181361g00018 - - csav:115719108 427.943