Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc181361g00014 | ATGGAGCAGTCAGGGAAATCACCCAAGAAATCACTACTCAAACCGTTTACCAGAGATCCACGTGGCTCCCTCGAAGTTTTCAACCCTACCTCCTCCTACTCCGCCGCAGCCGCAGTGGCAAATCCTACCGGCTCGCCAGCGCCGGCGCGTCCTCAGCCTATATGGAAAACCTGGGCGGCAGAGCAGCAGCTGCCTCGCAGTACCTCCTTCGACGAGCTCACCACCACCGCTGCCACGGCCGCAACAACCACTGCCACCTCCTGGATGGCACTTAAGGAAACCGCCCCGCTGTCCAGTTCGGAGTCTGGTGAGGCGGCGCAGAGAGCTGCAGAGTGGGGGTTGGTCCTGAAAACGGACACGGAGACAGGGAAGCCTCAGGGAGTAGCGGTTCGAAACTCCGACGGCGGCGGTTCGTCCCGGAGGAACTCAAAAAACTCGGCTCGCAACTCCGGCGACTCCTCGGACGGAGCGGAATCGCGCGGGATCCCGAGAGTATCGGAGGACCTGAAGAACGCACTCTCGACGTTCCAACAAACTTTCGTGGTTTCGGATGCTACCAAAGCCGATTACCCGATCCTTTACGCCAGTGCTGGATTCTTCAAGATGACTGGTTACACCTCCAAGGAGGTCATTGGTAGAAACTGTCGGTTTTTACAGGGTGCTGAAACGGATCCGGATGACGTGGCAAGGATAAGGGAAGCATTGGAAACTGGGAAGAGTTACTGTGGAAGGTTACTGAATTACAAGAAGGATGGGAAGCCCTTCTGGAACCTTCTTACAATTTCACCCATCAAGGACGAGGATGGCAAAGTCATCAAATTCATCGGAATGCAAGTGGAGGTTAGCAAGCACACGGAGGGGGCCAAGGAGAAGGCGTTACGTCCCAATGGCTTGCCGGAATCATTGATTCGATACGATGCACGGCAGAAAGAGAATGCTACAACCTCAGTATCGGAGTTGGTGAATGCCATAAAGCGTCCTCGAGCACTCAGTGAATCAACAAACCGCCGTCCCTTCACCAGAAAATCATTCGCCGCTGATCATCATCATCAGCAGCAGCAACAAGAGGCAGAGGACAAAGCAGAGAAAACATCAAGGAGAAAATCCGAGAGCATAGCTTCATCTGCTAGACGCAAATCACAAGGAGGAGGAGGAGATGGAATAACTTCATTGCAGCAAATCAGTGAGATCCCTGAAAAGAAGCACAAAAACTCCCGTCGCCGTTCTTTCATGGGGTTCATGAAGAAAAATCAGGCTGATGAAGAAAGCATAGATAACGAAGGTGTTGAGGAAGTGAGCTCAGACAGTGAGGATGATGATGAGAGGCCTGATAGTTTTGAATTTGAGGGCAGAGAGATCCAAAGGGAAAAGAGGAAGGGTCTTGATCTTGCTACAACACTTGAACGTATTGAGAAAAACTTTGTCATCACTGATCCTAGGCTCCCTGACAATCCCATTATATTTGCTTCTGACAGTTTCTTAGAGCTTACTGAATATAGTCGTGAAGAAATCTTGGGCAAAAATTGCAGATTTCTTCAAGGACCTGAAACAGATCCAGAAACTGTGAAAAAAATTAGACAAGCAATTGACAACCAAACTGAAGTTACTGTACAACTCATTAATTATACAAAGACCGGTAAAAAGTTCTGGAACTTGTTCCATCTGCAACCTATGCGTGACCAGAAGGGAGAAGTACAGTATTTTATTGGTGTTCAACTCGATGGTAGCCAACATGTGGAGCCTCTTCACAACTGCATCGCAGAAAATACTGCAAAGGAAGGAGAACAATTGGTCAAACAAACTGCAGAAAATGTTGATGAGGCAGTAAGAGAACTTCCAGATGCTAATATGAAACCGGACGATTTATGGATGAATCATTCGAAAGTGGTTCAGCCAAAACCTCATAGGAAGGAAGATGCTGCTTGGAGAGCCATCAAGAAGATCCTGGACAGTGGAGAACAGATAGGCTTAAAGCACTTTAGGCCAGTTAAACCTTTGGGATCAGGAGATACTGGAAGTGTGCATCTGGTGGAGCTATGTGGAACTGGTCACTATTTTGCCATGAAGGCTATGGATAAGGGTGTTATGCTCAATCGTAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTCGACATGTTGGACCATCCTTTTCTACCTGCATTATATGCTTCCTTTCAGACCAAATCACATGTTTGTTTGGTAACTGATTACTGCCCTGGTGGAGAACTCTTCCTGCTTCTTGATCGACAGCCAACAAAAGTTCTTAAGGAAGAGGCTGCCCGATTTTATGCTGCTGAGGTAGTGGTTGCATTGGAGTATCTTCATTGTCAAGGAATAATATATCGGGACTTGAAGCCAGAGAATGTGTTAATCCAGAGCAATGGGCATGTGGCTCTAACAGATTTTGATTTGTCATGTTTAACATCTTGCAAGCCCCAGCTGCTTCTACCAGCCACGGATGACAAGAAGAAAAAGAAGAGAAAACAACAGAAAGGTCAACAGGTTCCGGTGTTTATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGAACAGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTTGGTATTCTTCTATATGAAATGCTTTATGGGTATACACCATTCAGGGGAAAGTCAAGGCAAAAAACATTTGCAAATATTCTACACAAGGATCTTAAATTTCCCAAAAGCAAACCAGTAAGTCTCCATGGAAAGCAGCTAATTTATTGGTTGTTGCAGAGAGATCCCAAGAACAGATTGGGTTCACAAGAAGGAGCAAATGAAATTAAGCGTCATCCTTTCTTTAAGTCTGTCAATTGGGCATTAGTCCGCTGCATGACACCTCCTGAGCTTGATGCTCCTCTCTCGCTGGAAAATGAAGTCAAAGTGGACCCTGAATTGGAGGATCTGCAGCTAACTGTTTTCTGA | 2976 | 0.4681 | MEQSGKSPKKSLLKPFTRDPRGSLEVFNPTSSYSAAAAVANPTGSPAPARPQPIWKTWAAEQQLPRSTSFDELTTTAATAATTTATSWMALKETAPLSSSESGEAAQRAAEWGLVLKTDTETGKPQGVAVRNSDGGGSSRRNSKNSARNSGDSSDGAESRGIPRVSEDLKNALSTFQQTFVVSDATKADYPILYASAGFFKMTGYTSKEVIGRNCRFLQGAETDPDDVARIREALETGKSYCGRLLNYKKDGKPFWNLLTISPIKDEDGKVIKFIGMQVEVSKHTEGAKEKALRPNGLPESLIRYDARQKENATTSVSELVNAIKRPRALSESTNRRPFTRKSFAADHHHQQQQQEAEDKAEKTSRRKSESIASSARRKSQGGGGDGITSLQQISEIPEKKHKNSRRRSFMGFMKKNQADEESIDNEGVEEVSSDSEDDDERPDSFEFEGREIQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGKNCRFLQGPETDPETVKKIRQAIDNQTEVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNCIAENTAKEGEQLVKQTAENVDEAVRELPDANMKPDDLWMNHSKVVQPKPHRKEDAAWRAIKKILDSGEQIGLKHFRPVKPLGSGDTGSVHLVELCGTGHYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKSHVCLVTDYCPGGELFLLLDRQPTKVLKEEAARFYAAEVVVALEYLHCQGIIYRDLKPENVLIQSNGHVALTDFDLSCLTSCKPQLLLPATDDKKKKKRKQQKGQQVPVFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMLYGYTPFRGKSRQKTFANILHKDLKFPKSKPVSLHGKQLIYWLLQRDPKNRLGSQEGANEIKRHPFFKSVNWALVRCMTPPELDAPLSLENEVKVDPELEDLQLTVF | 991 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc181361g00014 | 991 | CDD | PAS | 192 | 281 | IPR000014 | - | |
| Stsc181361g00014 | 991 | ProSiteProfiles | PAS repeat profile. | 459 | 532 | IPR000014 | - | |
| Stsc181361g00014 | 991 | ProSiteProfiles | Protein kinase domain profile. | 660 | 951 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Stsc181361g00014 | 991 | ProSiteProfiles | PAC domain profile. | 533 | 587 | IPR000700 | - | |
| Stsc181361g00014 | 991 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Stsc181361g00014 | 991 | ProSiteProfiles | PAC domain profile. | 239 | 293 | IPR000700 | - | |
| Stsc181361g00014 | 991 | FunFam | LOV domain-containing protein | 448 | 612 | - | - | |
| Stsc181361g00014 | 991 | Gene3D | Transferase(Phosphotransferase) domain 1 | 744 | 964 | - | - | |
| Stsc181361g00014 | 991 | MobiDBLite | consensus disorder prediction | 345 | 374 | - | - | |
| Stsc181361g00014 | 991 | SMART | pas_2 | 167 | 236 | IPR000014 | - |
Showing 1 to 10 of 39 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc181361g00014 | K20715 | - | gmx:100817565 | 1491.48 |
Showing 1 to 1 of 1 entries