Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181361g00014 ATGGAGCAGTCAGGGAAATCACCCAAGAAATCACTACTCAAACCGTTTACCAGAGATCCACGTGGCTCCCTCGAAGTTTTCAACCCTACCTCCTCCTACTCCGCCGCAGCCGCAGTGGCAAATCCTACCGGCTCGCCAGCGCCGGCGCGTCCTCAGCCTATATGGAAAACCTGGGCGGCAGAGCAGCAGCTGCCTCGCAGTACCTCCTTCGACGAGCTCACCACCACCGCTGCCACGGCCGCAACAACCACTGCCACCTCCTGGATGGCACTTAAGGAAACCGCCCCGCTGTCCAGTTCGGAGTCTGGTGAGGCGGCGCAGAGAGCTGCAGAGTGGGGGTTGGTCCTGAAAACGGACACGGAGACAGGGAAGCCTCAGGGAGTAGCGGTTCGAAACTCCGACGGCGGCGGTTCGTCCCGGAGGAACTCAAAAAACTCGGCTCGCAACTCCGGCGACTCCTCGGACGGAGCGGAATCGCGCGGGATCCCGAGAGTATCGGAGGACCTGAAGAACGCACTCTCGACGTTCCAACAAACTTTCGTGGTTTCGGATGCTACCAAAGCCGATTACCCGATCCTTTACGCCAGTGCTGGATTCTTCAAGATGACTGGTTACACCTCCAAGGAGGTCATTGGTAGAAACTGTCGGTTTTTACAGGGTGCTGAAACGGATCCGGATGACGTGGCAAGGATAAGGGAAGCATTGGAAACTGGGAAGAGTTACTGTGGAAGGTTACTGAATTACAAGAAGGATGGGAAGCCCTTCTGGAACCTTCTTACAATTTCACCCATCAAGGACGAGGATGGCAAAGTCATCAAATTCATCGGAATGCAAGTGGAGGTTAGCAAGCACACGGAGGGGGCCAAGGAGAAGGCGTTACGTCCCAATGGCTTGCCGGAATCATTGATTCGATACGATGCACGGCAGAAAGAGAATGCTACAACCTCAGTATCGGAGTTGGTGAATGCCATAAAGCGTCCTCGAGCACTCAGTGAATCAACAAACCGCCGTCCCTTCACCAGAAAATCATTCGCCGCTGATCATCATCATCAGCAGCAGCAACAAGAGGCAGAGGACAAAGCAGAGAAAACATCAAGGAGAAAATCCGAGAGCATAGCTTCATCTGCTAGACGCAAATCACAAGGAGGAGGAGGAGATGGAATAACTTCATTGCAGCAAATCAGTGAGATCCCTGAAAAGAAGCACAAAAACTCCCGTCGCCGTTCTTTCATGGGGTTCATGAAGAAAAATCAGGCTGATGAAGAAAGCATAGATAACGAAGGTGTTGAGGAAGTGAGCTCAGACAGTGAGGATGATGATGAGAGGCCTGATAGTTTTGAATTTGAGGGCAGAGAGATCCAAAGGGAAAAGAGGAAGGGTCTTGATCTTGCTACAACACTTGAACGTATTGAGAAAAACTTTGTCATCACTGATCCTAGGCTCCCTGACAATCCCATTATATTTGCTTCTGACAGTTTCTTAGAGCTTACTGAATATAGTCGTGAAGAAATCTTGGGCAAAAATTGCAGATTTCTTCAAGGACCTGAAACAGATCCAGAAACTGTGAAAAAAATTAGACAAGCAATTGACAACCAAACTGAAGTTACTGTACAACTCATTAATTATACAAAGACCGGTAAAAAGTTCTGGAACTTGTTCCATCTGCAACCTATGCGTGACCAGAAGGGAGAAGTACAGTATTTTATTGGTGTTCAACTCGATGGTAGCCAACATGTGGAGCCTCTTCACAACTGCATCGCAGAAAATACTGCAAAGGAAGGAGAACAATTGGTCAAACAAACTGCAGAAAATGTTGATGAGGCAGTAAGAGAACTTCCAGATGCTAATATGAAACCGGACGATTTATGGATGAATCATTCGAAAGTGGTTCAGCCAAAACCTCATAGGAAGGAAGATGCTGCTTGGAGAGCCATCAAGAAGATCCTGGACAGTGGAGAACAGATAGGCTTAAAGCACTTTAGGCCAGTTAAACCTTTGGGATCAGGAGATACTGGAAGTGTGCATCTGGTGGAGCTATGTGGAACTGGTCACTATTTTGCCATGAAGGCTATGGATAAGGGTGTTATGCTCAATCGTAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTCGACATGTTGGACCATCCTTTTCTACCTGCATTATATGCTTCCTTTCAGACCAAATCACATGTTTGTTTGGTAACTGATTACTGCCCTGGTGGAGAACTCTTCCTGCTTCTTGATCGACAGCCAACAAAAGTTCTTAAGGAAGAGGCTGCCCGATTTTATGCTGCTGAGGTAGTGGTTGCATTGGAGTATCTTCATTGTCAAGGAATAATATATCGGGACTTGAAGCCAGAGAATGTGTTAATCCAGAGCAATGGGCATGTGGCTCTAACAGATTTTGATTTGTCATGTTTAACATCTTGCAAGCCCCAGCTGCTTCTACCAGCCACGGATGACAAGAAGAAAAAGAAGAGAAAACAACAGAAAGGTCAACAGGTTCCGGTGTTTATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGAACAGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTTGGTATTCTTCTATATGAAATGCTTTATGGGTATACACCATTCAGGGGAAAGTCAAGGCAAAAAACATTTGCAAATATTCTACACAAGGATCTTAAATTTCCCAAAAGCAAACCAGTAAGTCTCCATGGAAAGCAGCTAATTTATTGGTTGTTGCAGAGAGATCCCAAGAACAGATTGGGTTCACAAGAAGGAGCAAATGAAATTAAGCGTCATCCTTTCTTTAAGTCTGTCAATTGGGCATTAGTCCGCTGCATGACACCTCCTGAGCTTGATGCTCCTCTCTCGCTGGAAAATGAAGTCAAAGTGGACCCTGAATTGGAGGATCTGCAGCTAACTGTTTTCTGA 2976 0.4681 MEQSGKSPKKSLLKPFTRDPRGSLEVFNPTSSYSAAAAVANPTGSPAPARPQPIWKTWAAEQQLPRSTSFDELTTTAATAATTTATSWMALKETAPLSSSESGEAAQRAAEWGLVLKTDTETGKPQGVAVRNSDGGGSSRRNSKNSARNSGDSSDGAESRGIPRVSEDLKNALSTFQQTFVVSDATKADYPILYASAGFFKMTGYTSKEVIGRNCRFLQGAETDPDDVARIREALETGKSYCGRLLNYKKDGKPFWNLLTISPIKDEDGKVIKFIGMQVEVSKHTEGAKEKALRPNGLPESLIRYDARQKENATTSVSELVNAIKRPRALSESTNRRPFTRKSFAADHHHQQQQQEAEDKAEKTSRRKSESIASSARRKSQGGGGDGITSLQQISEIPEKKHKNSRRRSFMGFMKKNQADEESIDNEGVEEVSSDSEDDDERPDSFEFEGREIQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGKNCRFLQGPETDPETVKKIRQAIDNQTEVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNCIAENTAKEGEQLVKQTAENVDEAVRELPDANMKPDDLWMNHSKVVQPKPHRKEDAAWRAIKKILDSGEQIGLKHFRPVKPLGSGDTGSVHLVELCGTGHYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKSHVCLVTDYCPGGELFLLLDRQPTKVLKEEAARFYAAEVVVALEYLHCQGIIYRDLKPENVLIQSNGHVALTDFDLSCLTSCKPQLLLPATDDKKKKKRKQQKGQQVPVFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMLYGYTPFRGKSRQKTFANILHKDLKFPKSKPVSLHGKQLIYWLLQRDPKNRLGSQEGANEIKRHPFFKSVNWALVRCMTPPELDAPLSLENEVKVDPELEDLQLTVF 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181361g00014 991 CDD PAS 192 281 IPR000014 -
Stsc181361g00014 991 ProSiteProfiles PAS repeat profile. 459 532 IPR000014 -
Stsc181361g00014 991 ProSiteProfiles Protein kinase domain profile. 660 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181361g00014 991 ProSiteProfiles PAC domain profile. 533 587 IPR000700 -
Stsc181361g00014 991 MobiDBLite consensus disorder prediction 1 23 - -
Stsc181361g00014 991 ProSiteProfiles PAC domain profile. 239 293 IPR000700 -
Stsc181361g00014 991 FunFam LOV domain-containing protein 448 612 - -
Stsc181361g00014 991 Gene3D Transferase(Phosphotransferase) domain 1 744 964 - -
Stsc181361g00014 991 MobiDBLite consensus disorder prediction 345 374 - -
Stsc181361g00014 991 SMART pas_2 167 236 IPR000014 -
Stsc181361g00014 991 SMART pas_2 461 530 IPR000014 -
Stsc181361g00014 991 SMART serkin_6 660 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181361g00014 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Stsc181361g00014 991 FunFam LOV domain-containing protein 659 743 - -
Stsc181361g00014 991 SUPERFAMILY PYP-like sensor domain (PAS domain) 186 278 IPR035965 -
Stsc181361g00014 991 Coils Coil 591 611 - -
Stsc181361g00014 991 Pfam PAS domain 482 574 IPR000014 -
Stsc181361g00014 991 Pfam PAS domain 188 282 IPR000014 -
Stsc181361g00014 991 CDD PAS 474 574 IPR000014 -
Stsc181361g00014 991 SUPERFAMILY PYP-like sensor domain (PAS domain) 475 574 IPR035965 -
Stsc181361g00014 991 Gene3D PAS domain 449 612 - -
Stsc181361g00014 991 NCBIfam PAS domain S-box protein 484 574 IPR000014 -
Stsc181361g00014 991 NCBIfam PAS domain S-box protein 191 286 IPR000014 -
Stsc181361g00014 991 Pfam Protein kinase domain 663 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181361g00014 991 PANTHER FLIPPASE KINASE 1-RELATED 441 969 - -
Stsc181361g00014 991 ProSitePatterns Protein kinases ATP-binding region signature. 666 689 IPR017441 GO:0005524
Stsc181361g00014 991 MobiDBLite consensus disorder prediction 345 453 - -
Stsc181361g00014 991 MobiDBLite consensus disorder prediction 424 445 - -
Stsc181361g00014 991 Gene3D PAS domain 179 346 - -
Stsc181361g00014 991 CDD STKc_phototropin_like 658 975 - -
Stsc181361g00014 991 FunFam Putative LOV domain-containing protein 179 335 - -
Stsc181361g00014 991 SUPERFAMILY Protein kinase-like (PK-like) 647 970 IPR011009 -
Stsc181361g00014 991 SMART pac_2 536 578 IPR001610 -
Stsc181361g00014 991 SMART pac_2 242 284 IPR001610 -
Stsc181361g00014 991 ProSiteProfiles PAS repeat profile. 165 236 IPR000014 -
Stsc181361g00014 991 FunFam Putative LOV domain-containing protein 744 963 - -
Stsc181361g00014 991 MobiDBLite consensus disorder prediction 118 163 - -
Stsc181361g00014 991 Gene3D Phosphorylase Kinase; domain 1 659 743 - -
Stsc181361g00014 991 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181361g00014 Stsc-Chr181361 71320 78611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181361g00014 1 991 AGC Kinase Gene Family AT3G45780 68.058 0.0 1345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc181361g00014 Pkinase 1.8e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181361g00014 K20715 - gmx:100817565 1491.48