Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181361g00010 ATGTATGCACACTCCAACTGCACCGAATCCGCACGCACCACCTCATCACCTCTTCTCTCGCCAATAATGCACCATTTCCCAGAGGAACTGGCCCTCACGGAGTTGGAATCGCTTCTAATCAACTGCCACAACAACCCGGAGATAATAAGCTTGAACAACAAGAGTAGCAGTAGCAGTAGTTACAGCGAGCAATCAGGGTTGGCGATGCAGAGGAGCCTTAGCAGTCACTCTCTCCATAATAACAATCCCTTCTCCGGTCTCTTGGCTGACTTGTTCCACAACGATGGTCCTCTTCGGAGAGTTTGCAGCACCGGTGATCTCCACGGGAGTCATGGAGGGATGATGATGCATAATAATAATGAATCAGAAAGTCCATTGTCAAGTGAAAGCAGCATGATCATAGAAGGAATGAGTAGAGCTTCTAGGTATAGCCCTGAGGAGAAGAAACTCAGAATTCAGAGGTATAGAACAAAACGGAACCAGAGAAACTTCAACAAGAAAATTAAGTATGTTTGCAGGAAGACTTTAGCAGACAGCAGGCCGCGCATTAGAGGACGATTCGCGAGGAACGACGAAATTGACAAGAATAATTATCCTTCATCAGTTCATCAATGGAGTCACATTGGTGCTGGAGCAGAGGAAGACGAAGAGGATCAAAATTGGGTCAGTATATTTGATTCACTAGTGGCTGCAAATACGGATCAAGAGTCCCACAACAGTTCTTCATTCGGTTTATTGTATTAA 744 0.453 MYAHSNCTESARTTSSPLLSPIMHHFPEELALTELESLLINCHNNPEIISLNNKSSSSSSYSEQSGLAMQRSLSSHSLHNNNPFSGLLADLFHNDGPLRRVCSTGDLHGSHGGMMMHNNNESESPLSSESSMIIEGMSRASRYSPEEKKLRIQRYRTKRNQRNFNKKIKYVCRKTLADSRPRIRGRFARNDEIDKNNYPSSVHQWSHIGAGAEEDEEDQNWVSIFDSLVAANTDQESHNSSSFGLLY 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181361g00010 247 MobiDBLite consensus disorder prediction 53 74 - -
Stsc181361g00010 247 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 52 207 IPR045281 GO:0009909
Stsc181361g00010 247 ProSiteProfiles CCT domain profile. 148 190 IPR010402 GO:0005515
Stsc181361g00010 247 Pfam CCT motif 150 190 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181361g00010 Stsc-Chr181361 41632 43203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181361g00010 140 195 C2C2-CO-like Transcription Factor Family AT5G15850 44.643 1.06e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc181361g00010 CCT 2.6e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181361g00010 - - ccaj:109806671 242.276