Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181361g00003 ATGGTTCTCAGGAAGGGATTGCTCATCGTTAAACACCAGGTTTCTGACTCAGCAACGACGCCGGCGACGCCTTCTTGTCCTCGGCAGTGCTTCTCCGATTCTATTCTGGAAGTAAGCGTGGAAAGCGCTCGCTCCATCATAGCCAAATGGGACCCACTTCCCAACCCTCCAAGTCCCAGAGGCAACAAAGATCTCTTCACTAACACGCGCCAAGAAGCCAAACAGTATCTTAACGCCGTTTCAAAGCTGCAGTCCGCTATGCAACACCTCCTCACACTCAATTCCTCCTCGGACCGCCTCGTCGAGGCATACTCCCTAATGCAAGTCGCCATGAAGAGGCTTGAGAGAGAGTTATATCGTATATCAGCTGAGATTAGGGACCATGTGCACACTCCGTACTCCCTCAACTCATCCTGCAGCAGCTCCGCCTCCACAACCACTACTGATCGCCACAGCGACAGCATCTCCGGTTCCGACGTCTACGACAATTCCTCCGACGATGAGAGTATTCGTGTTGCGAGGGTGGATTTGAAGGCCATCGTGGAGTGTATGTTCTCCGCTGGATATGGCAAAGAGTGCGTCCAGATTTACACCAAGGTCAGAAAATCGATTGTGACTGAGGCACTGCAGAACCTCGGAGTTGAAAAGCCTAAGCTCTCTAAGATCAAGAAGATGCAGTGGGAGATGTTCGATTTCAAGATCAAGACCTGGCTTAACGCCGTCGAAGTCTCCGTCGGATCTCTGTTTCCCGGCGAGTGGAGTCTCTGTAACTACATCTTTCCCTCTTCGGAAAACACCACCGTAGTTGAGTCCTGCTTTACCGAGATTTGCAAAGACGGTGCCGAAATGTTGTTTATGTTCCCTGAAATCATAGCAAAGTGCGAGAAAACGCCGGAGAAAATGTTCAGACTACTCGATCTCTACGAGGCTCTCTCTCAAAATTGGCCGAAAATCAAAAGCATATTCTCATACGAATCAACCTCCAGCGTAAGGTTACAAGTTGGAGTTTCTCATCTCAAAATCGGCGAGGCCGTTAGAGCGACGCTATCAACCTTCGAAACGGCGATCATGAAGGAGTCCTCAAAGACGCCGGTCCCCGGCGGAAGGAACCACCCGCTCACTCGCTACGTCATGAACTACATCTCATTCCTAGCCGATTACAGCGACACTCCGGCTCCGCCGGATCTGGCGGAGCGGCTAGCGTGGGAGATTCTTCTGCTGCTCTGCAAGATCGACGGAAAAGCAGAACTCTACAAGAATGTGGCGCTAGGTTACCTGTTTCTGGCGAACAACATGCAATACGTGGTCACAAAGGCGCGGAACTCGAAACTAGGGTCCATCCTCGGCGACGATTGGCTTGCGAGTCACGATCAGAAGGTGAAGGAATACGCATCAAAGTACGTGAACATGGCGTGGAGCACGGTGGAGATGTCTCTGCCGGAGACTCCAAAGGAGGCGTTGGCACCGGCGGAAGCCTCCGCCAAGATCCAATTGTTCAATATGCGGTTCCAGGAAGCTTGCCGAGTGCAGTCCACGTGGATCGTACCCGACCTGAAACTCCGGGAGGATATCCAGAAATTGGTAGCTTCGAAGGTAGTGCCCAAGTACCGGGATTTCTACGAACGGAATTGGGTCGGGTCGGAGTCGGTTATAACGTTCTCGCCCGATGATTTGCGGAATCGTATTTCTTCTCTTATTTTGCATGATGTTGAAGATGCGGGGTGCGTTACTACCCATTCTTCTTCTCTTCTTAGCTAG 1758 0.5148 MVLRKGLLIVKHQVSDSATTPATPSCPRQCFSDSILEVSVESARSIIAKWDPLPNPPSPRGNKDLFTNTRQEAKQYLNAVSKLQSAMQHLLTLNSSSDRLVEAYSLMQVAMKRLERELYRISAEIRDHVHTPYSLNSSCSSSASTTTTDRHSDSISGSDVYDNSSDDESIRVARVDLKAIVECMFSAGYGKECVQIYTKVRKSIVTEALQNLGVEKPKLSKIKKMQWEMFDFKIKTWLNAVEVSVGSLFPGEWSLCNYIFPSSENTTVVESCFTEICKDGAEMLFMFPEIIAKCEKTPEKMFRLLDLYEALSQNWPKIKSIFSYESTSSVRLQVGVSHLKIGEAVRATLSTFETAIMKESSKTPVPGGRNHPLTRYVMNYISFLADYSDTPAPPDLAERLAWEILLLLCKIDGKAELYKNVALGYLFLANNMQYVVTKARNSKLGSILGDDWLASHDQKVKEYASKYVNMAWSTVEMSLPETPKEALAPAEASAKIQLFNMRFQEACRVQSTWIVPDLKLREDIQKLVASKVVPKYRDFYERNWVGSESVITFSPDDLRNRISSLILHDVEDAGCVTTHSSSLLS 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181361g00003 585 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 559 IPR004140 GO:0000145|GO:0006887
Stsc181361g00003 585 MobiDBLite consensus disorder prediction 134 165 - -
Stsc181361g00003 585 SUPERFAMILY Cullin repeat-like 68 565 IPR016159 -
Stsc181361g00003 585 MobiDBLite consensus disorder prediction 134 163 - -
Stsc181361g00003 585 Gene3D Exocyst complex component Exo70 60 569 - -
Stsc181361g00003 585 Pfam Exo70 exocyst complex subunit 236 563 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181361g00003 Stsc-Chr181361 13842 15681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181361g00003 17 565 EXO70 exocyst subunit family AT5G59730 42.256 1.63e-146 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181361g00003 K07195 - adu:107461556 844.343