Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181360g00013 ATGGAAGAAGGGGATGAGTGTTTTTGCGCGCTGTGTGGGAAGATGGCTCAGATGCTGTGCGAGTCGGACCAGGCTAAGCTATGCTGGGACTGCGATCGCACCGTTCACGGAGCCAACTTCCTTGTCGCTAAGCATCTCAGAGTGCTCCTCTGCCGTCACTGCCACCGCCCCACTCCCTGGAAGGCTTCTGGGCCCTCCCTCACTATTACCTCCTCTCTCTGCCATCCTTGCTCCTCTTCTTCTTCTCTTCCCGTCACCTCCACCATTCATCGTCAACATGATTCTGAAGATGAATCTGAGGATGACGAAGATGAAGATGAAGATGAAGAGGAAGAGGAAGAGGAAGAAGAAGAGGAGGAGGGAGAGAACCAGGTGGTGCCTTTGTCTTCCGTTTCCGGTGGTGGTAATAACGGCGACGATGATGGAGACATGTCTAGCAATACTTCATCTTCTTTTCGATTCAACAACTTGAAGCGCTTTCAACATAATCATAACAATATCCACCATTCTTCTTCTATTTCTGATGAAGATGATGAAATAGGGTGTTGCTCGTCGGAAAGATTAGAAGGTGATAATGATGATGAACACTATTCCATCTCTATGAGGCCATTCAAACACCCAAGAATCTTTAATCACAGGGATGATCTAGATTGCCACAATCATAGACGGTGA 672 0.4777 MEEGDECFCALCGKMAQMLCESDQAKLCWDCDRTVHGANFLVAKHLRVLLCRHCHRPTPWKASGPSLTITSSLCHPCSSSSSLPVTSTIHRQHDSEDESEDDEDEDEDEEEEEEEEEEEEGENQVVPLSSVSGGGNNGDDDGDMSSNTSSSFRFNNLKRFQHNHNNIHHSSSISDEDDEIGCCSSERLEGDNDDEHYSISMRPFKHPRIFNHRDDLDCHNHRR 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181360g00013 223 MobiDBLite consensus disorder prediction 97 123 - -
Stsc181360g00013 223 SMART bboxneu5 4 50 IPR000315 GO:0008270
Stsc181360g00013 223 MobiDBLite consensus disorder prediction 80 150 - -
Stsc181360g00013 223 MobiDBLite consensus disorder prediction 125 150 - -
Stsc181360g00013 223 Pfam B-box zinc finger 8 45 IPR000315 GO:0008270
Stsc181360g00013 223 Coils Coil 96 120 - -
Stsc181360g00013 223 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181360g00013 Stsc-Chr181360 84542 86141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181360g00013 9 77 C2C2-CO-like Transcription Factor Family AT5G54470 65.217 3.98e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181360g00013 - - aip:107614151 286.96