Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181360g00007 ATGAGAGATGGTGATACTTTGGTTTCAGCTGGTGGAACTTTTGAACTTGGATTCTTCAGCCCCGGAGACTCAAGTGGTCGATACTTGGGAATATGGTACAAGCAATCTCCTTCAACACTAACATGGGTTGCCAACCGAAACAAACGAATCGACAGCAACGACTCAGTGTTGGAAATCAACAACCAAGGAGTTCTTGTCCTGCACAATAGTGCAAACAAGACATTCTGGTTCTCCAATGTTTCAAAAGCAGCAGAGAATCCAGTTGCACAGCTGTTGGACTCAGGAAATCTTGTTGTGAGGGATGGAAGTGGTGGTAACATGGAGAATCTCTTATGGCAAAGTTTTGATTATCCTTGTGATACTTTGTTGCCAGGAATGAAACTTGGATGGAATCTAGAGACAGGCCTAAATAGGTTCCTATCTTCTTGGAAAAGTACAGATGATCCTGATTCCGGAGACTACTCGTTTAGAATAGATCTTAGAGGTTATCCACAAGCAGTTCAAATGAAGGGAGCTTCTATAATGACCCGGGCAGGATCATGGAATGGCCTTACCTTCACAGCACTTCCATATCATAAGCAAAGTCCAGTGTTCAAATCTGAATTTGTTTTGAATGAAAAGGAAATATTCTATGAGTTCCAAGTCCTTAACAATTCTACTTTAGTTAGATTTGTCATGACCCCTTCGGGGAATCGGCAGCTTATCCATTGGACAAGTGAAACCAATGGTTGGGAGACTGTCATGACTATGCCATCAGTTCGGTGCGACAATTATGCGTTGTGTGGTGTGAATTCTGTTTGCAATTCAGTGAACACTCCAGATTGTGCTTGCCTGAAAGGATTTGCACCAAGGATTTCAAGAGAGTGGAATATGTCACATTGGTCTAATGGTTGTGTTAGGATCACCCAATTAGATTGTAGAAAAGATGGGTTCATGAAGTACACAGGCATTGTTCTTCCTGACACGTCTTCATCTAGGTATAATAAGACCATTGACCTTCAAGAATGTGACAAGTTATGCCTGCAAAACTGTTCCTGCACAGCGTATGCAAATTTGGATAAGTGCGACGAAGGAAGTGGCTGCTTGCTTTGGTTTGGTGATCTGATTGACATGAGGCAAGCATCTGAAGGTGGCCAAGATATTTATATTCGAGTTCCTTCTTTGGAGCTAGAACATAACAAAAAGAGTCACAAAAAGAAGATTGTAGGCATCATTACTGGCTCTGCTGTATTCTTGATGTGCTTAATACTTGGACTTGCCATATGTGTATGGAAATATAAATTTGAAAAGCCAGAAAAATTTCCAGCAGGGGAGTTGAAAGTGGTTTTCTGGAAAGAACTATTATGCAGAAGGGTGGAGGAGGACAGTGATCTTCCAACATTTGATTTATCAACCATATTTTATGCCACAAATCGCTTTTCTAGCTACAACAAATTAGGAGAAGGTGGCTTCGGACCTGTATACAAGGGTGTCCTTGCCGATGGCACTGAGATCGCTGTCAAGAGGCTTTCCAAGAATTCTGAGCAAGGACAGCAAGAGTTCAAAACTGAAGTGCAGTTGATTGCTAAACTTCAGCATCGCAATCTTGTAAAGCTTCTCGGTTGTTGCATTAAACAAAAAGAGAAACTCTTGATTTATGAGTTCATGCCAAATGGAAGTTTGGATCACTTTATTTTTGATGATGGTAGAAGAGAATTATTAGATTGGACTAAGCGCTTCCAAATTATTAGTGGGATAGCTCGAGGACTACTTTATCTACATCATGACTCAAGGCTGAGAATCATTCATAGAGATCTTAAAACGAGTAATATTCTTCTTGATTGTGATATGAGCCCAAAAATATCAGACTTCGGTCTTGCAAGAATATTTGGAGGAGATCAAACTGTGGCCAATACAAAGAGAGTGATGGGAACTCAAGGTTATATCTCTCCTGAGTACGCAATGCATGGCTCTTTCTCGATGAAATCCGATGTTTTTAGCTTTGGTGTAATTATACTCGAGGTAGTTAGCGGGATGAAGAACAGGCAACTCTCTATCTCTCACCAATTTCTTAACCTTCTTGGACATGTAAGTATTGATCAATAG 2085 0.4067 MRDGDTLVSAGGTFELGFFSPGDSSGRYLGIWYKQSPSTLTWVANRNKRIDSNDSVLEINNQGVLVLHNSANKTFWFSNVSKAAENPVAQLLDSGNLVVRDGSGGNMENLLWQSFDYPCDTLLPGMKLGWNLETGLNRFLSSWKSTDDPDSGDYSFRIDLRGYPQAVQMKGASIMTRAGSWNGLTFTALPYHKQSPVFKSEFVLNEKEIFYEFQVLNNSTLVRFVMTPSGNRQLIHWTSETNGWETVMTMPSVRCDNYALCGVNSVCNSVNTPDCACLKGFAPRISREWNMSHWSNGCVRITQLDCRKDGFMKYTGIVLPDTSSSRYNKTIDLQECDKLCLQNCSCTAYANLDKCDEGSGCLLWFGDLIDMRQASEGGQDIYIRVPSLELEHNKKSHKKKIVGIITGSAVFLMCLILGLAICVWKYKFEKPEKFPAGELKVVFWKELLCRRVEEDSDLPTFDLSTIFYATNRFSSYNKLGEGGFGPVYKGVLADGTEIAVKRLSKNSEQGQQEFKTEVQLIAKLQHRNLVKLLGCCIKQKEKLLIYEFMPNGSLDHFIFDDGRRELLDWTKRFQIISGIARGLLYLHHDSRLRIIHRDLKTSNILLDCDMSPKISDFGLARIFGGDQTVANTKRVMGTQGYISPEYAMHGSFSMKSDVFSFGVIILEVVSGMKNRQLSISHQFLNLLGHVSIDQ 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181360g00007 694 SUPERFAMILY alpha-D-mannose-specific plant lectins 40 149 IPR036426 -
Stsc181360g00007 694 Gene3D Transferase(Phosphotransferase) domain 1 549 690 - -
Stsc181360g00007 694 Pfam D-mannose binding lectin 39 144 IPR001480 -
Stsc181360g00007 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Stsc181360g00007 694 CDD STKc_IRAK 479 671 - -
Stsc181360g00007 694 Pfam PAN-like domain 306 371 IPR003609 -
Stsc181360g00007 694 Pfam S-locus glycoprotein domain 177 284 IPR000858 GO:0048544
Stsc181360g00007 694 CDD B_lectin 3 118 IPR001480 -
Stsc181360g00007 694 Gene3D Phosphorylase Kinase; domain 1 444 548 - -
Stsc181360g00007 694 CDD PAN_AP_plant 302 386 - -
Stsc181360g00007 694 Gene3D - 1 115 IPR036426 -
Stsc181360g00007 694 Gene3D Hepatocyte Growth Factor 304 383 - -
Stsc181360g00007 694 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 3 677 - -
Stsc181360g00007 694 SMART ntp_6 306 385 IPR003609 -
Stsc181360g00007 694 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 115 - -
Stsc181360g00007 694 ProSiteProfiles PAN/Apple domain profile. 306 386 IPR003609 -
Stsc181360g00007 694 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 549 640 - -
Stsc181360g00007 694 ProSiteProfiles Bulb-type lectin domain profile. 1 112 IPR001480 -
Stsc181360g00007 694 SMART serkin_6 473 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181360g00007 694 Pfam Protein tyrosine and serine/threonine kinase 476 674 IPR001245 GO:0004672|GO:0006468
Stsc181360g00007 694 SUPERFAMILY Protein kinase-like (PK-like) 458 674 IPR011009 -
Stsc181360g00007 694 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 305 385 - -
Stsc181360g00007 694 ProSiteProfiles Protein kinase domain profile. 473 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181360g00007 694 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 442 548 - -
Stsc181360g00007 694 SMART blect_4 2 118 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181360g00007 Stsc-Chr181360 14411 17041 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181360g00007 453 692 Receptor kinase-like Gene Family AT4G23130 61.382 7.63e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc181360g00007 PK_Tyr_Ser-Thr 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181360g00007 - - aip:107611884 849.351