Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181360g00006 ATGAGAGATGGTGATACTTTGGTTTCAGCTGGTGGAACTTTTGAACTTGGATTCTTCAGCCCCGGAGACTCAAGTGGTCGATACTTGGGAATATGGTACAAGCAATCTCCTTCAACACTAACATGGGTTGCCAACCGAAACAAACGAATCGACAGCAACGACTCAGTGTTGGAAATCAACAACCAAGGAGTTCTTGTCCTGCACAATAGTGCAAACAAGACATTCTGGTTCTCCAATGTTTCAAAAGCAGCAGAGAATCCAGTTGCACAGCTGTTGGACTCAGGAAATCTTGTTGTGAGGGATGGAAGTGGTGGTAACATGGAGAATCTCTTATGGCAAAGTTTTGATTATCCTTGTGATACTTTGTTGCCAGGAATGAAACTTGGATGGAATCTAGAGACAGGCCTAAATAGGTTCCTATCTTCTTGGAAAAGTACAGATGATCCTGATTCCGGAGACTACTCGTTTAGAATAGATCTTAGAGGTTATCCACAAGCAGTTCAAATGAAGGGAGCTTCTATAATGACCCGGGCAGGATCATGGAATGGCCTTACCTTCACAGCACTTCCATATCATAAGCAAAGTCCAGTGTTCAAATCTGAATTTGTTTTGAATGAAAAGGAAATATTCTATGAGTTCCAAGTCCTTAACAATTCTACTTTAGTTAGATTTGTCATGACCCCTTCGGGGAATCGGCAGCTTATCCATTGGACAAGTGAAACCAATGGTTGGGAGACTGTCATGACTATGCCATCAGTTCGGTGCGACAATTATGCGTTGTGTGGTGTGAATTCTGTTTGCAATTCAGTGAACACTCCAGATTGTGCTTGCCTGAAAGGATTTGCACCAAGGATTTCAAGAGAGTGGAATATGTCACATTGGTCTAATGGTTGTGTTAGGATCACCCAATTAGATTGTAGAAAAGATGGGTTCATGAAGTACACAGGCATTGTTCTTCCTGACACGTCTTCATCTAGGTATAATAAGACCATTGACCTTCAAGAATGTGACAAGTTATGCCTGCAAAACTGTTCCTGCACAGCGTATGCAAATTTGGATAAGTGCGACGAAGGAAGTGGCTGCTTGCTTTGGTTTGGTGATCTGATTGACATGAGGCAAGCATCTGAAGGTGGCCAAGATATTTATATTCGAGTTCCTTCTTTGGAGCTAGAACATAACAAAAAGAGTCACAAAAAGAAGATTGTAGGCATCATTACTGGCTCTGCTGTATTCTTGATGTGCTTAATACTTGGACTTGCCATATGTGTATGGAAATATAAATTTGAAAAGCCAGAAAAATTTCCAGCAGGGGAGTTGAAAGTGGTTTTCTGGAAAGAACTATTATGCAGAAGGGTGGAGGAGGACAGTGATCTTCCAACATTTGATTTATCAACCATATTTTATGCCACAAATCGCTTTTCTAGCTACAACAAATTAGGAGAAGGTGGCTTCGGACCTGTATACAAGGGTGTCCTTGCCGATGGCACTGAGATCGCTGTCAAGAGGCTTTCCAAGAATTCTGAGCAAGGACAGCAAGAGTTCAAAACTGAAGTGCAGTTGATTGCTAAACTTCAGCATCGCAATCTTGTAAAGCTTCTCGGTTGTTGCATTAAACAAAAAGAGAAACTCTTGATTTATGAGTTCATGCCAAATGGAAGTTTGGATCACTTTATTTTTGATGATGGTAGAAGAGAATTATTAGATTGGACTAAGCGCTTCCAAATTATTAGTGGGATAGCTCGAGGACTACTTTATCTACATCATGACTCAAGGCTGAGAATCATTCATAGAGATCTTAAAACGAGTAATATTCTTCTTGATTGTGATATGAGCCCAAAAATATCAGACTTCGGTCTTGCAAGAATATTTGGAGGAGATCAAACTGTGGCCAATACAAAGAGAGTGATGGGAACTCATGGTTATATCTCTCCTGAGTATGCAGTGCATGGTTCTTTCTCAATGAAATCCGATGTGTTTAGCTTTGGTGTAATCGTGCTCGAGGTAGTGAGTGCGAGGAGGAACAGGGAATTCTCAATTCCCCACCAAGATCTGAACCTTCTTGGATATGCATGGAAATTGTGGAGTGAAGACAAGTCTATGGAGCTGGTAGATGAATCACTTGGTGATTCAATTGTTGAAGATCAAGTACTGAGATGCATTCAGATAGGGCTTTTGTGTGTGCAAGAGAGACCAGAACACAGGCCTAACATGTCATCAGTAATCCATATGCTCAATGATGATAAACCACTTTCCAGGCCGAACCAGCCGGCGTTTTATCCACACCAAGAAAGCAGTTCTTCACCCATAAACAATGAAATGTTTTCAAGAAATGAGGCTTCCATCACATTGTTGGAGGCAAGATAG 2364 0.412 MRDGDTLVSAGGTFELGFFSPGDSSGRYLGIWYKQSPSTLTWVANRNKRIDSNDSVLEINNQGVLVLHNSANKTFWFSNVSKAAENPVAQLLDSGNLVVRDGSGGNMENLLWQSFDYPCDTLLPGMKLGWNLETGLNRFLSSWKSTDDPDSGDYSFRIDLRGYPQAVQMKGASIMTRAGSWNGLTFTALPYHKQSPVFKSEFVLNEKEIFYEFQVLNNSTLVRFVMTPSGNRQLIHWTSETNGWETVMTMPSVRCDNYALCGVNSVCNSVNTPDCACLKGFAPRISREWNMSHWSNGCVRITQLDCRKDGFMKYTGIVLPDTSSSRYNKTIDLQECDKLCLQNCSCTAYANLDKCDEGSGCLLWFGDLIDMRQASEGGQDIYIRVPSLELEHNKKSHKKKIVGIITGSAVFLMCLILGLAICVWKYKFEKPEKFPAGELKVVFWKELLCRRVEEDSDLPTFDLSTIFYATNRFSSYNKLGEGGFGPVYKGVLADGTEIAVKRLSKNSEQGQQEFKTEVQLIAKLQHRNLVKLLGCCIKQKEKLLIYEFMPNGSLDHFIFDDGRRELLDWTKRFQIISGIARGLLYLHHDSRLRIIHRDLKTSNILLDCDMSPKISDFGLARIFGGDQTVANTKRVMGTHGYISPEYAVHGSFSMKSDVFSFGVIVLEVVSARRNREFSIPHQDLNLLGYAWKLWSEDKSMELVDESLGDSIVEDQVLRCIQIGLLCVQERPEHRPNMSSVIHMLNDDKPLSRPNQPAFYPHQESSSSPINNEMFSRNEASITLLEAR 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181360g00006 787 CDD STKc_IRAK 479 745 - -
Stsc181360g00006 787 PIRSF SRK 1 787 IPR024171 GO:0004674
Stsc181360g00006 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 115 - -
Stsc181360g00006 787 SMART serkin_6 473 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181360g00006 787 ProSiteProfiles Protein kinase domain profile. 473 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181360g00006 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 442 548 - -
Stsc181360g00006 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 305 385 - -
Stsc181360g00006 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Stsc181360g00006 787 Pfam Protein tyrosine and serine/threonine kinase 476 744 IPR001245 GO:0004672|GO:0006468
Stsc181360g00006 787 Gene3D Phosphorylase Kinase; domain 1 444 548 - -
Stsc181360g00006 787 CDD B_lectin 3 118 IPR001480 -
Stsc181360g00006 787 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 3 731 - -
Stsc181360g00006 787 CDD PAN_AP_plant 302 386 - -
Stsc181360g00006 787 SUPERFAMILY Protein kinase-like (PK-like) 457 769 IPR011009 -
Stsc181360g00006 787 MobiDBLite consensus disorder prediction 757 772 - -
Stsc181360g00006 787 SMART ntp_6 306 385 IPR003609 -
Stsc181360g00006 787 Gene3D Hepatocyte Growth Factor 304 383 - -
Stsc181360g00006 787 Pfam D-mannose binding lectin 39 144 IPR001480 -
Stsc181360g00006 787 Pfam S-locus glycoprotein domain 177 284 IPR000858 GO:0048544
Stsc181360g00006 787 ProSiteProfiles PAN/Apple domain profile. 306 386 IPR003609 -
Stsc181360g00006 787 MobiDBLite consensus disorder prediction 752 772 - -
Stsc181360g00006 787 ProSiteProfiles Bulb-type lectin domain profile. 1 112 IPR001480 -
Stsc181360g00006 787 Pfam PAN-like domain 306 371 IPR003609 -
Stsc181360g00006 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 40 149 IPR036426 -
Stsc181360g00006 787 Gene3D Transferase(Phosphotransferase) domain 1 549 755 - -
Stsc181360g00006 787 SMART blect_4 2 118 IPR001480 -
Stsc181360g00006 787 Gene3D - 1 115 IPR036426 -
Stsc181360g00006 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 549 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181360g00006 Stsc-Chr181360 10060 17041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181360g00006 451 761 Receptor kinase-like Gene Family AT4G23190 55.312 1.19e-119 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc181360g00006 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181360g00006 - - aip:107611884 991.875