Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181360g00004 ATGCAATGCAGTGGTTATATTTCTCCGGAGTATGCAGTGCGCGGATCCTTCTCGACGAAATCTGATGTGTTCGCCTTTGGTGTAATTGTTCTTGAGATAGTCAGTGGGAGGAAGAACAGAGAGTTTTGTGTCCCTCAACAAAGTCTTAACCTTCTTGGACATGCATGGGAGCTTTGGAATGAGGAGAGGCCTATGGAGCTTGTAGATGAATCACTTCGCAATTCGGTAATTGAAGTTGAAGCATTGAGGTGTATACACATAGGACTGTTATGTGTTCAAGGAAGACCTGAAGATAGGCCTAACATGTCATCTGTAGTTCGTATGCTGGAAGATGATAAACCGTTGCCGCGGCCAAGGCCGCCGGCATTTTACTCACACTCACACCATGAAGAATCTGTGGGAAGAGATGATGAAGTTTCAGCAAATGAGATTACCATATCATTGTTAGGGGCAAGATAG 459 0.4466 MQCSGYISPEYAVRGSFSTKSDVFAFGVIVLEIVSGRKNREFCVPQQSLNLLGHAWELWNEERPMELVDESLRNSVIEVEALRCIHIGLLCVQGRPEDRPNMSSVVRMLEDDKPLPRPRPPAFYSHSHHEESVGRDDEVSANEITISLLGAR 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181360g00004 152 MobiDBLite consensus disorder prediction 111 137 - -
Stsc181360g00004 152 SUPERFAMILY Protein kinase-like (PK-like) 5 129 IPR011009 -
Stsc181360g00004 152 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 147 - -
Stsc181360g00004 152 Pfam Protein tyrosine and serine/threonine kinase 6 109 IPR001245 GO:0004672|GO:0006468
Stsc181360g00004 152 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1 114 - -
Stsc181360g00004 152 Pfam Domain of unknown function (DUF3403) 114 152 IPR021820 GO:0004674
Stsc181360g00004 152 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
Stsc181360g00004 152 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181360g00004 Stsc-Chr181360 6440 7350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181360g00004 5 124 Receptor kinase-like Gene Family AT4G11480 50.000 5.28e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc181360g00004 PK_Tyr_Ser-Thr 7.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181360g00004 - - aip:107611884 265.774