Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181360g00003 ATGAACGCGAAAATATCAGACTTTGGTCTTGCTAGGACATTTGCCGGAGATCAAACTGAGGCCAGAACAAAGAGAGTGATGGGAACATATGGTTATATTTCTCCGGAGTATGCAGTGCGCGGATCCTTCTCGACGAAATCTGATGTGTTCGCCTTTGGTGTAATTGTTCTTGAGATAGTCAGTGGGAGGAAGAACAGAGAGTTTTGTGTCCCTCAACAAAGTCTTAACCTTCTTGGACATGCATGGGAGCTTTGGAATGAGGAGAGGCCTATGGAGCTTGTAGATGAATCACTTCGCAATTCGGTAATTGAAGTTGAAGCATTGAGGTGTATACACATAGGACTGTTATGTGTTCAAGGAAGACCTGAAGATAGGCCTAACATGTCATCTGTAGTTCGTATGCTGGAAGATGATAAACCGTTGCCGCGGCCAAGGCCGCCGGCATTTTACTCACACTCACACCATGAAGAATCTGTGGGAAGAGATGATGAAGTTTCAGCAAATGAGATTACCATATCATTGTTAGGGGCAAGATAG 537 0.4451 MNAKISDFGLARTFAGDQTEARTKRVMGTYGYISPEYAVRGSFSTKSDVFAFGVIVLEIVSGRKNREFCVPQQSLNLLGHAWELWNEERPMELVDESLRNSVIEVEALRCIHIGLLCVQGRPEDRPNMSSVVRMLEDDKPLPRPRPPAFYSHSHHEESVGRDDEVSANEITISLLGAR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181360g00003 178 SUPERFAMILY Protein kinase-like (PK-like) 1 155 IPR011009 -
Stsc181360g00003 178 Gene3D Transferase(Phosphotransferase) domain 1 1 141 - -
Stsc181360g00003 178 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181360g00003 178 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 173 - -
Stsc181360g00003 178 Pfam Domain of unknown function (DUF3403) 140 178 IPR021820 GO:0004674
Stsc181360g00003 178 Pfam Protein tyrosine and serine/threonine kinase 3 135 IPR001245 GO:0004672|GO:0006468
Stsc181360g00003 178 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 14 140 - -
Stsc181360g00003 178 MobiDBLite consensus disorder prediction 137 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181360g00003 Stsc-Chr181360 6440 7350 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181360g00003 1 168 Receptor kinase-like Gene Family AT3G45860 52.601 8.66e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc181360g00003 PK_Tyr_Ser-Thr 1.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181360g00003 - - aip:107611884 320.472