Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181359g00008 ATGAAGGAGGGTGGTGGTGGTGGTAGGAAGCAAGGTGCAATGTCGCCGTGTGCGGCGTGCAAGCTTCTCCGGCGGCGATGCGCTAAGGATTGCGTGTTTGCACCGTATTTTCCAGCGGATGAGCCCCAAAAATTTGGGAGTGTCCACAAGGTTTTTGGTGCTAGCAATGTCAACAAGATGTTACAGGAATTACCAGAGCACCAAAGAAGTGATGCAGTGAGTTCAATGGTGTATGAAGCAAATGCAAGAGTAAGAGACCCTGTGTACGGATGTGTGGGTGCAATATCTTCTCTTCAGCAACAAGTTGATGTTCTCCAAACCCAATTGGCTCTTGCTCAAGCTGAAGTTGTTCACATGAGAATGCGCCAATTCCCATCTTCTAATAATAATAATAATCATGACCCTCCAATTTCATCTTCATCAAATCATCACCATCCAATTTCACCACCATCAGAGAATAATAATAACAATTTGTGCCATACCAAGTCCCTTTTTTCCATGGACATGGTCCTTGATCATCAATCCAACATGGGACAGTCCCTTTGGTCATGCTAG 555 0.4505 MKEGGGGGRKQGAMSPCAACKLLRRRCAKDCVFAPYFPADEPQKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVHMRMRQFPSSNNNNNHDPPISSSSNHHHPISPPSENNNNNLCHTKSLFSMDMVLDHQSNMGQSLWSC 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181359g00008 184 MobiDBLite consensus disorder prediction 124 159 - -
Stsc181359g00008 184 Coils Coil 95 115 - -
Stsc181359g00008 184 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 14 149 - -
Stsc181359g00008 184 ProSiteProfiles LOB domain profile. 15 116 IPR004883 -
Stsc181359g00008 184 Pfam Lateral organ boundaries (LOB) domain 16 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181359g00008 Stsc-Chr181359 39644 45134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181359g00008 1 184 AS2 family AT1G31320 67.568 3.88e-69 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc181359g00008 LOB 4.4e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181359g00008 - - qsa:O6P43_001193 244.202