Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181359g00007 ATGCAGGATCTGAATTGCATCCATGAGGAGGGGCATTTGGAAGAGGAAATTGAGTTTTTGTGTGATGATAAAGAATATGTCTCCAAGGTTGGGATGACATTTAAGTCATGTATAGAAGCTAATGAATTCTACAAGGAGTATGCTAAACGAGCTGGATTTGCTTCCAAAATCAGAAACTCACAAAGGAATAAAGAGACCGGTGGAATCAAGAATCAACTCTTCACATGTAAAAGAGATGGAAAAAGGAAATCTGACATTCCCGAGGCGGAGAAGACGAACCCGATGTCTCCGGCAAGGATGTTCGTTCATATCGATAAGTTGACTCAGCGTTATGTTATTTCCAAAGTTGTATTGGAGCATTCGCATTCTTGTTTTGCTGATCTTGCAGGGATGCTACCTCAACACAGAGAACTTAGCATGTACGTTCGTCACGTCATTGTGAACAACGATCAGACAGGCATCAGGCTGAGCAAAACTTAA 480 0.4146 MQDLNCIHEEGHLEEEIEFLCDDKEYVSKVGMTFKSCIEANEFYKEYAKRAGFASKIRNSQRNKETGGIKNQLFTCKRDGKRKSDIPEAEKTNPMSPARMFVHIDKLTQRYVISKVVLEHSHSCFADLAGMLPQHRELSMYVRHVIVNNDQTGIRLSKT 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181359g00007 159 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 157 - -
Stsc181359g00007 159 Pfam FAR1 DNA-binding domain 42 125 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181359g00007 Stsc-Chr181359 25623 26456 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc181359g00007 FAR1 5.2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181359g00007 - - adu:110280446 140.198