Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181357g00015 ATGCAAAGAAAAGAAGGACTCTTCAAGAAAATTTCAACGTTTTCAAAGCTATGTGGAGTTGAAGCATGTCTAATTCTTTATGATGATGATTCTTCTAAACCAATGACATGGCCACAAGAACATTCAAAGGTTCTCTCCATGATTGAAAAATATGACCTTCAAAAGAATAATGATCATGAGAGACCCCCCAAGATCTTTGATCAAGAAGAGTTTTTCAAGAACAAGAAGGTCATGGCTGAGGCTGAGATTTCTAAATTGAGAAAGAGGTTTCTCCAATTGAAGTATCCCACCGTGGATCCAATCTTCAAAAGCTTGGATCAGAACCAAGTGATGGAGTTCATTGCTATGTTGGATGGTAAAATTGAAGCTTGCAATAAAAGAATTGATGGCATGTTGAAGGGTAATCAAGATAATAATGGTAGCATTAGCAACTTCTTCAACTTTGACCAAAGTCAACTCAGTTTCATGAACAACATTCCTAATCTTCATCATGATTATTGTTTTGATCCAAATGTTACTCCTTTTGTGATAAACAATAATGGGGTGATCATAGATTCTACTACAAATAATCAAATTGGTGAATGTTATGATATGTATTGGGATGATCTTGGTGAGGTTGAGAATTTGATTAGTGAATCAAGTGAGTTATTGTTGGATTGGACTGATAATAACCCACTTGTTCATGATGATCCTAATTTGGAGAACATTATTTCTCATCAATTTCAGAATGTGTCAGAATCTTTGCAAATGTTGCCACCAACAGTGGATGAATTTTTTGCTGATGAGCATAACAATATGATCACCAATTTTAGTCATTCAACATGTATATGA 831 0.3454 MQRKEGLFKKISTFSKLCGVEACLILYDDDSSKPMTWPQEHSKVLSMIEKYDLQKNNDHERPPKIFDQEEFFKNKKVMAEAEISKLRKRFLQLKYPTVDPIFKSLDQNQVMEFIAMLDGKIEACNKRIDGMLKGNQDNNGSISNFFNFDQSQLSFMNNIPNLHHDYCFDPNVTPFVINNNGVIIDSTTNNQIGECYDMYWDDLGEVENLISESSELLLDWTDNNPLVHDDPNLENIISHQFQNVSESLQMLPPTVDEFFADEHNNMITNFSHSTCI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181357g00015 276 Gene3D - 1 78 IPR036879 GO:0003677|GO:0046983
Stsc181357g00015 276 SUPERFAMILY SRF-like 2 61 IPR036879 GO:0003677|GO:0046983
Stsc181357g00015 276 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 3 37 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181357g00015 Stsc-Chr181357 69057 69887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181357g00015 2 127 Type I MADS-box Gene Family AT5G55690 31.111 5.93e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Stsc181357g00015 SRF-TF 3.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181357g00015 - - adu:107476111 285.419