Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181357g00007 ATGGGAAACAACTGTGTTGGATCAAGAAAGTGTTCCAAAGATGATGGCACATATACAGGTTTCATTTCGTGGTGCCGGCCAAGGAAAGCGAAGGCAGGCGCCGACAAAGGCGAAGAAGATGTGAGCAAAACTGAAAATGACACAGAAGCTGTTCGACAAAAGGCCCCAGAGGTTGTTAAAATTGATAAAGAGGTGGTGAAGCCAACTCAACCCAAAGAGGTTCAAAATGATACTAAGCATTCAGAACCAAAAAGACAAGTTGAGGAGATTAAATCGCCAGCCCCAGCCCCAGCTCCAGCTCCGGCTCCAGCGCCTGCGCCTGCTCCTGCTCCAGCTCCAGCCCCGGCTCCTGCTCCCGCCCCTGCTCCTGCTCCAGCTCCAGCTCCAGCTCCAATTCCAACTCCTGCTCCAGTTCAAGCTCCAGCTCCAGCTCCAACAAATAATCAAGGGGAAGAAAAGGTTAAAGTAGGAGAGCCTGCAAAAGAAAAGAAGCCTGTCACTGTGAAGAGGCAGATAAGTGCAGGCCTCAGAAAAGGCTCTATCTTGCAAAGGAAAACTCCTGTCCTTAAGGACTTCTATACTGTGGGGTCGAAACTCGGACAAGGGCAATTTGGAACAACCTACCATTGTGTGGAGAAGGCTACTGGAACCAAGTATGCATGCAAGTCCATTTTGAAGAGGAAACTGGTGACTGATGAAGATGTTGAAGATGTGAGGAGGGAGATTCAGATAATGCATCACTTGGCAGGCTGCCCCAATGTGATTTCCATTAAGGAAGCTTATGAGGATGCAGTCGCAGTTCATGTTGTGATGGAGTTGTGTGCAGGGGGTGAGCTCTTTGATAGGATTGTGGAAAGAGGGCATTACACAGAGAGAAAAGCAGCCAAACTAGCAAGGACTATAGTTGGTGTTATCGAGTCTTGCCACGCACTTGGAGTAATGCATCGCGACCTTAAGCCGGAGAACTTTCTTTTTGTTGATCAGCAGGAAGATGCACTCCTTAAAGCAATAGATTTTGGCCTCTCTACTTTCTTCAAACCAGGAGACATTTTTGATGATGTGGTAGGAAGCCCCTATTATGTTGCACCTGAAGTTCTCCGAAAGCGTTACGGCCAAGAAGCTGATGTGTGGAGTGCTGGTGTCATCATATACATTCTCCTATGTGGTGTACCTCCATTTTGGGGAGAAAACGAGCAAGAGATTTTCGACTCAATTTTGAAGAGCAAACTGGATTTCTCATCAGCACCATGGCCTAGTATCTCTGAAGGTGCAAAAGACTTGGTTAGGAAGATGCTTGATAGAGATCCTAGCAAACGAATAACGGCATTTGAAGTTCTTCGTAAGTTCCTTTAA 1353 0.4701 MGNNCVGSRKCSKDDGTYTGFISWCRPRKAKAGADKGEEDVSKTENDTEAVRQKAPEVVKIDKEVVKPTQPKEVQNDTKHSEPKRQVEEIKSPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPIPTPAPVQAPAPAPTNNQGEEKVKVGEPAKEKKPVTVKRQISAGLRKGSILQRKTPVLKDFYTVGSKLGQGQFGTTYHCVEKATGTKYACKSILKRKLVTDEDVEDVRREIQIMHHLAGCPNVISIKEAYEDAVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVGVIESCHALGVMHRDLKPENFLFVDQQEDALLKAIDFGLSTFFKPGDIFDDVVGSPYYVAPEVLRKRYGQEADVWSAGVIIYILLCGVPPFWGENEQEIFDSILKSKLDFSSAPWPSISEGAKDLVRKMLDRDPSKRITAFEVLRKFL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181357g00007 450 Gene3D Transferase(Phosphotransferase) domain 1 280 450 - -
Stsc181357g00007 450 MobiDBLite consensus disorder prediction 29 89 - -
Stsc181357g00007 450 ProSitePatterns Protein kinases ATP-binding region signature. 199 226 IPR017441 GO:0005524
Stsc181357g00007 450 Pfam Protein kinase domain 193 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181357g00007 450 Gene3D Phosphorylase Kinase; domain 1 195 279 - -
Stsc181357g00007 450 CDD STKc_CAMK 192 447 - -
Stsc181357g00007 450 MobiDBLite consensus disorder prediction 94 142 - -
Stsc181357g00007 450 FunFam calcium-dependent protein kinase 1 279 450 - -
Stsc181357g00007 450 MobiDBLite consensus disorder prediction 27 168 - -
Stsc181357g00007 450 FunFam Calcium-dependent protein kinase 1 195 278 - -
Stsc181357g00007 450 MobiDBLite consensus disorder prediction 154 168 - -
Stsc181357g00007 450 ProSiteProfiles Protein kinase domain profile. 193 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181357g00007 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Stsc181357g00007 450 SMART serkin_6 193 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181357g00007 450 SUPERFAMILY Protein kinase-like (PK-like) 191 447 IPR011009 -
Stsc181357g00007 450 PANTHER SERINE/THREONINE-PROTEIN KINASE 180 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181357g00007 Stsc-Chr181357 36504 38236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181357g00007 1 446 EF-hand Containing Proteins AT3G10660 56.167 4.95e-164 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Stsc181357g00007 Pkinase 5.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181357g00007 K13412 - gmx:100783079 488.034