Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181355g00015 ATGTCAGAGCCAAGTTATGCATTTGCAAAGGCTGTGGCTGCTACAGCTGGGGCTATGTTACTTATTGCAGGGATTTTCTTTTACTTGTTCCAAAAATATGTACTTGCTACATACCCCAAGAGGCACAAATTTCTATATGATTATGAAAGTATAAGGAAATTTGTTGGAGGCAATGTGAAGGGACTAATTGTTGAGGAAAATGGGGCTGATGTTCTTTATATGTTGGACACTGGAGGCAAACAGTTGGTAACAGGATTCACAAGCAGTAGATTCAATCCTAGTTTTGAAGATGATGATTTAGAACGAGAAAAGAGAATAGATGTTGTGGTCCAAAGATCCAAAATATCAAAGCCTAATAAGGTGACTCTGGAACCTCTACTTCCCCCACTATCACAAGCTTCACCAATAATTCATGACAAGAAAACTCAACCACCACCACCACCGCCGCCGCCACCTCCTCCGCCTCCGCCTCCACCTCCTCGACCTCAACTACTGCCACCACCACCAAGGGCACTGCCACCTGGTCCATCTCCACCTCCAAAGGCCTTAAAGCCCCCACCTGTGCCTAAAGAGAAACCAAAGAGCCAAAGCACCAAAGAGGCTGTTACTTTTGCTTGCGAAACAAGGCTTAAGCCTCTACATTGGGATAAAGTTATGGCTAATGTTGATCATTCAACAGTGTGGGATCAGATCAACGATGGGTCCTTTAGGGTCGATGATGAACTTATGGAAACACTCTTTGGTTATTCAACTACCAACAAAACTCAGACACCAAAAGAAAAAACTACCAGCAAAACTCAAGAAAGAAAGAAAGGTGTCTCAACTTTGGCAAAGCCCAACGCTAACACACCAACAAGAATATTCATTTTGGAGCCAAGAAAATCCCAAAACATTGCAATTGTTCTAAGATCACTTGCCACCTCTCGCAAAGCCATCTTGGAAGCACTACGTGACGGCCAGGGACTCAGCATCGAAACCCTCGAAAAGCTCACAACAATAGCTCCCACACAAGAAGAAGAATCCAAGATAATGCAGTTCAGTGGCAACCCTGAAAGACTGCAAGATGCCGAGTCTTTCCTCTACCACATCCTCAAAGCTGTTCCAACCACGTTCAATCGTCTCAAAGCGATGCTTTTCAGGTTTACTTATGACTCTGAAGTTCTTCAACTGAAGGAATATTTGCAAGCACTCGAAAACGGTTGCAGGGAACTGAGAACTAGTGCTCTTTTCCTGAAGCTTCTTGAGGCAATTCTCAAAGCTGGAAACAGAATGAATGCAGGAACATCAAGAGGGAATGCAAAAGGTTTCAATTTGAGTGCTCTTAGAAAACTCTCTGACGTGAAAAGCACAGATGGGAAGACTAGTTTGCTTCACTTCATAGTGGAACAAGTAGTTCAGTCAGAAGGTAAAAGAAAAGCTATGTATCAAAGAATAAATGGCGAAAAAGAATACACAATGCTTGGTTTCAGTGGACTGGAAGCGTTAAGAGGTGAGTTATCCGAAGCAAAGAAAGCGGCGAGCATAGAGTATCAAACTTTCATCACAATGTGTTCCAATCTAGATTCTCATGTGACTGAAATTAAGGAGATTGTAACAAAATGTTCTGGCAGCGAGATTAGCATTGAAGGGTGTGGGTTTATAAAGGAAATGAAAGGGTTCATAGAGGAAGCTGAGGAAGAGCTTAAGGTTGTTAACAAGGAGCAAACAAGGATCATGGATCTTGTGAGGAGAACTAATGGTTATTATCTACCAGGAGCATTGTTATCTAAAGACAACAGCAATTTGACGAACCCGTTTGAATTGTTTGTGATCGTAAAAGACTTTGTTGATATGGTGGATCAGGCTTGTGTGGAGCTTAAAAGGAAGATGGAAATGGAAAAGAAGGGTGTTGCAGGAGCAGCAGAAAGTGGATTGGAACCATCAAAGAGGGCACCACCTAGATTTCCTAACTTTGATTTATATTTTCCACCAAATGCGCTGGAATCATCTACTTCATTCAGCCAATCAGAAGATGATTCCTGA 2022 0.4238 MSEPSYAFAKAVAATAGAMLLIAGIFFYLFQKYVLATYPKRHKFLYDYESIRKFVGGNVKGLIVEENGADVLYMLDTGGKQLVTGFTSSRFNPSFEDDDLEREKRIDVVVQRSKISKPNKVTLEPLLPPLSQASPIIHDKKTQPPPPPPPPPPPPPPPPPRPQLLPPPPRALPPGPSPPPKALKPPPVPKEKPKSQSTKEAVTFACETRLKPLHWDKVMANVDHSTVWDQINDGSFRVDDELMETLFGYSTTNKTQTPKEKTTSKTQERKKGVSTLAKPNANTPTRIFILEPRKSQNIAIVLRSLATSRKAILEALRDGQGLSIETLEKLTTIAPTQEEESKIMQFSGNPERLQDAESFLYHILKAVPTTFNRLKAMLFRFTYDSEVLQLKEYLQALENGCRELRTSALFLKLLEAILKAGNRMNAGTSRGNAKGFNLSALRKLSDVKSTDGKTSLLHFIVEQVVQSEGKRKAMYQRINGEKEYTMLGFSGLEALRGELSEAKKAASIEYQTFITMCSNLDSHVTEIKEIVTKCSGSEISIEGCGFIKEMKGFIEEAEEELKVVNKEQTRIMDLVRRTNGYYLPGALLSKDNSNLTNPFELFVIVKDFVDMVDQACVELKRKMEMEKKGVAGAAESGLEPSKRAPPRFPNFDLYFPPNALESSTSFSQSEDDS 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181355g00015 673 Coils Coil 547 574 - -
Stsc181355g00015 673 MobiDBLite consensus disorder prediction 140 192 - -
Stsc181355g00015 673 SMART it6_source 200 627 IPR015425 -
Stsc181355g00015 673 SUPERFAMILY Formin homology 2 domain (FH2 domain) 285 629 - -
Stsc181355g00015 673 ProSiteProfiles Formin homology-2 (FH2) domain profile. 200 638 IPR015425 -
Stsc181355g00015 673 MobiDBLite consensus disorder prediction 251 278 - -
Stsc181355g00015 673 Pfam Formin Homology 2 Domain 207 612 IPR015425 -
Stsc181355g00015 673 Gene3D Formin, FH2 domain 222 642 IPR042201 -
Stsc181355g00015 673 PANTHER FORMIN-RELATED 9 651 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Stsc181355g00015 673 MobiDBLite consensus disorder prediction 136 201 - -
Stsc181355g00015 673 MobiDBLite consensus disorder prediction 630 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181355g00015 Stsc-Chr181355 57204 59994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181355g00015 10 669 FH2 protein (formin) Gene Family AT1G70140 38.957 8.71e-139 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181355g00015 - - gmx:100819989 608.216