Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181355g00014 ATGGCATCTGCCGCCGATCTTTTCCTTCACCGATTGCCGGAAGTGTCAGCGCGTGAGCTCCACGTCCTTGCAGTTGATGACAGCCATGTTGATCGCAAGGTCATCGAACGCTTGCTCAAAATCTCTTCATGCAAAGTAACAGTTGTGGACAGTGGAACTAGAGCTTTACAGTATCTAGGGTTGGATGGTGGAGAGGAAAACAGTTCAATTGATTTTGATAGCATGAAGGTTAATCTGATAATGACCGACTATTCGATGCCGGGGATGACAGGATTTGAACTCCTAAAGAGGATCAAGGAATCATCAATTTTTAGAGAGATTCCGGTGGTGGTGATGTCTTCTGAGAATATCTTGACCCGAATTGATAGTTGCTTGGAAGAAGGAGCAGAGGAGTTTCTATTGAAACCTGTTAAATTGTCGGATGTAAAACGAGTGACGGATTTCATCATGAGAGGTGAAGGGAAGAAAGGAGGCAAAATATCTCAAAAACGAAGGCGCTTGGATGATTGCATCCCTTCTCTCTCTGCTGAACTTTCACCATTGTCCCCATCCACCTTGGCCTCAAAGAAATCTAAACTATGA 582 0.4433 MASAADLFLHRLPEVSARELHVLAVDDSHVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGGEENSSIDFDSMKVNLIMTDYSMPGMTGFELLKRIKESSIFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMRGEGKKGGKISQKRRRLDDCIPSLSAELSPLSPSTLASKKSKL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181355g00014 193 SUPERFAMILY CheY-like 19 151 IPR011006 -
Stsc181355g00014 193 Pfam Response regulator receiver domain 22 143 IPR001789 GO:0000160
Stsc181355g00014 193 Gene3D - 20 189 - -
Stsc181355g00014 193 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 161 IPR045279 GO:0009736
Stsc181355g00014 193 SMART REC_2 20 146 IPR001789 GO:0000160
Stsc181355g00014 193 CDD REC_typeA_ARR 22 145 - -
Stsc181355g00014 193 ProSiteProfiles Response regulatory domain profile. 21 150 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181355g00014 Stsc-Chr181355 52443 55101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181355g00014 16 164 Response Regulator Gene Family AT3G48100 74.497 5.04e-76 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc181355g00014 Response_reg 6.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181355g00014 K14492 - gmx:100819165 277.33