Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181354g00027 ATGTTTCACTCAAATGCATCTGGTTGGAGGACTTGTGAGACTTGTAGGAAGCGGATTCATTGTGGATGTATTGTTTCAAGTGATACCTTTATGTTGTTGGATCCTGGTGGAATTGAGTGCCTTGCATGCGCTAAAAAACATATGGCTTTGCCATCTAACTCGCAATGGCAACAAACTTTCTCCCTTCAAAATCATTTACCAGAAAGACTTAGAGACATACCTGGAAAAAATTGGAGTCAATTAGCCGGATCAGGTCCTGTTCCATGGAAGCAAGCACCGAGTTTGTTCAATTCAGCTTCTTCGTCTGACTTGCTTCCAGATGTGCCATCCCTAGTTGAATTACCTAATAACATTGAAAAAAGGTATGTCATTGAAAGGTTACCTGCCTCGACCGTGGAAAAGAAAAATGAGGATTTGTCTGGAATATCTGTTAATTGGAGTGTAAAGCTTGGTTCTCGGGAAATGATGTTTATGAATGGTAAAGCAGGCTCTATCTTTCTTCAAACATTTTACTTTTATATTGTCAAGTGTAGGGGATGA 540 0.3981 MFHSNASGWRTCETCRKRIHCGCIVSSDTFMLLDPGGIECLACAKKHMALPSNSQWQQTFSLQNHLPERLRDIPGKNWSQLAGSGPVPWKQAPSLFNSASSSDLLPDVPSLVELPNNIEKRYVIERLPASTVEKKNEDLSGISVNWSVKLGSREMMFMNGKAGSIFLQTFYFYIVKCRG 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181354g00027 179 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181354g00027 Stsc-Chr181354 104992 107344 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181354g00027 1 135 B3 DNA Binding Superfamily AT4G21550 38.732 1.94e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181354g00027 K09287 - gmx:100807252 261.536