Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181354g00009 ATGGGATGTACAAATTTGGTGTTGCATGTTCGAGTGTTTGTCACTTTGATGGTGATTTTTGCTGCAACTTTCTCTGCAGTTGGAGACACTGACATAGTTGATGTTGCAGCAATCAATAGTCTATATGTTGCTCTTGGCTCACCACCTCTTCTAGGGTGGAAGCCTGTGGGAGGAGATCCATGTTTCGAAATGTGGCAAGGTGTTGGCTGTGTGTTTTCCAACATCACTTCCATAAGACTTGATGGCCTGAATTTGGGTGGAGAGCTTGGCAGTAATTTGAATTTTCCATCCATCTTAGAAATTGATCTTAGCAACAACCACATTGGAGGGCCCATTCCATTCACTTTGCCCCCTACTATAACGAGCTTGTCTCTCTCAGGAAACCAGCTAAATGGAAGCATTCCAGATGCCTTATCATTACTAACTCAATTGTCACACTTGGATTTGTCAAATAACAACTTGAGTGGTCAGCTGCCCTCCTCAACAGTGACTTTATCATCCCTTACTACATTATACTTGCAGAACAATCAACTCTCCGGGACCCTTTATGTTTTGCAGGACCTGCCTCTTCAGGAGCTGAATATTGAGAATAACTCATTCTCTGGTCCAATTCCTCCAAAGTTGCTGAGTGTCCCTATTTTCAGAAAAGATGGAAATCCATTTAATACTAGTGTTATTCCATCACCTGCCGCAGCACCATCACCTACAGCTATGGCTCCATCCCCTGGGAAATCACCGTGGAGAGTCGCAAATAGTCCTTCTTCCCCAGCAGCATCAATGTTTGCAAGTGCTAGGAAGTCATTTGTAGCTAAGAACATCATTTGGATTGCTGGTGCTGTTGTTTTGATATTTATTTTGTTAGGAGTTTGTATCTTTATGTTTTGGTTTAAGCGAAGGCCAGAAAAGAAAAATGTTAACAAGCAAAATGTTGGTGTCTTCGAAAGTCCTTTACATAAATCTACATGCAGTGACAATTCCTTTGAAGCAACAAACCAGGAGGAGAAAGCAATTGAGAAACCATCACTTGTATCTGAAGTGCCAAATAAACGAACAAATTTGATTCCAAAGGTTCAAGATGAACAAGAAAAATATGTGAAAACAGCATCTGCAACTTTGCAACACAGTCATGGTTCCGAGTTAATCAACACCAGTGAGGCTTCCAAACTTTCACACCTTCAGCCACCGCCACGTCCTCACCCAACGACACAAGGTCAGAAGTTGGTCCTCAATCCAGCTATACCTGCCAAAGGGTCTGAAATAAATGACAAAACAAGTTCCCTTGAAGTCTATTCTATTGCATCACTTCAACAATATACAAATAGCTTTTCCCAAGAAAATTTTATTGGGGAAGGCACCCTAGGGCCTGTTTATAGGGCTGAGTTACCTGATGGAAAGATATTGGCTGTGAGGAAATTAGATGCCACTGCTTCTATGGAGCAGAGCCATGAACAGTTTCTCCAATTAGTGTCCAACATCTCAAAACTTCAGCACCCTAATATTGTAAAGTTTATAGGCTACTGTGCTGAGCATAGCCAACGGTTGCTTGTATATGAGTATTGCAGTAATGGAACCCTGCATGATGCACTGCATGGCAATGAAGAATGCCGTATTAAACTAACATGGAATGCTCGCATTCAGGTGGCTCTTGGAGCTGCAAGAGCTTTAGAGTATATGCATGAGAACTTTCGGCCACCTATTGTGCATCGAAATTTTAAGTCTGCTAATGTGCTCCTAAATGACAACTTGGAAGTGTGCATATCTGATTGTGGATTAGGTCCTTTGCTGTCTTCTGGCTCTGCTGGTCAGCTATCAGGACGACTCCTCACGGCTTATGGTTACAGTGCTCCTGAATTCGAGTTCGGAAGTTATACACATCAAAGTGATGTCTTCAGTTTTGGAGTGGTAATGCTGGAGCTTCTCACGGGACGAAAATCCCACGACAGGTCGCTTCCTCGCGGGGAGCAGATATTGGTGAGATGGGCAGTCCCTCAACTCCATGACATCGATGCATTGTCGAAAATGGTTGACCCCAGCTTAAAAGGAGCCTATCCTATGAAGTCCTTGTCGCGTTTCGCAGATATTGTTTCTTCATGCGTCCAGCATGAACCTGAATTCAGGCCAGCAATGTCTGAAGTTGTTCAAGATCTTCTAAGGATGATGTAA 2163 0.43 MGCTNLVLHVRVFVTLMVIFAATFSAVGDTDIVDVAAINSLYVALGSPPLLGWKPVGGDPCFEMWQGVGCVFSNITSIRLDGLNLGGELGSNLNFPSILEIDLSNNHIGGPIPFTLPPTITSLSLSGNQLNGSIPDALSLLTQLSHLDLSNNNLSGQLPSSTVTLSSLTTLYLQNNQLSGTLYVLQDLPLQELNIENNSFSGPIPPKLLSVPIFRKDGNPFNTSVIPSPAAAPSPTAMAPSPGKSPWRVANSPSSPAASMFASARKSFVAKNIIWIAGAVVLIFILLGVCIFMFWFKRRPEKKNVNKQNVGVFESPLHKSTCSDNSFEATNQEEKAIEKPSLVSEVPNKRTNLIPKVQDEQEKYVKTASATLQHSHGSELINTSEASKLSHLQPPPRPHPTTQGQKLVLNPAIPAKGSEINDKTSSLEVYSIASLQQYTNSFSQENFIGEGTLGPVYRAELPDGKILAVRKLDATASMEQSHEQFLQLVSNISKLQHPNIVKFIGYCAEHSQRLLVYEYCSNGTLHDALHGNEECRIKLTWNARIQVALGAARALEYMHENFRPPIVHRNFKSANVLLNDNLEVCISDCGLGPLLSSGSAGQLSGRLLTAYGYSAPEFEFGSYTHQSDVFSFGVVMLELLTGRKSHDRSLPRGEQILVRWAVPQLHDIDALSKMVDPSLKGAYPMKSLSRFADIVSSCVQHEPEFRPAMSEVVQDLLRMM 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181354g00009 720 ProSiteProfiles Protein kinase domain profile. 442 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181354g00009 720 SUPERFAMILY L domain-like 34 208 - -
Stsc181354g00009 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 31 147 - -
Stsc181354g00009 720 Pfam Protein tyrosine and serine/threonine kinase 445 716 IPR001245 GO:0004672|GO:0006468
Stsc181354g00009 720 Gene3D Transferase(Phosphotransferase) domain 1 520 720 - -
Stsc181354g00009 720 SUPERFAMILY Protein kinase-like (PK-like) 424 716 IPR011009 -
Stsc181354g00009 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 520 720 - -
Stsc181354g00009 720 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 718 IPR046959 -
Stsc181354g00009 720 Gene3D Ribonuclease Inhibitor 36 232 IPR032675 -
Stsc181354g00009 720 Gene3D Phosphorylase Kinase; domain 1 412 519 - -
Stsc181354g00009 720 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 413 519 - -
Stsc181354g00009 720 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181354g00009 Stsc-Chr181354 37916 42014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181354g00009 34 720 Strubbelig Receptor Gene Family AT4G03390 50.800 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Stsc181354g00009 PK_Tyr_Ser-Thr 5.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181354g00009 - - ahf:112783685 1284.63