Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181354g00001 ATGGATTCAACTGAAAATCATCAGCACCAGCAACAACCCCAACTCCCACCTGGATTCCGGTTCCACCCAACAGACGAAGAACTCATCGTTCACTACCTCAAGAGGAAAGCATCCTCTGCTCCTCTTCCCGTTGCTATCATAGCTGAAGTTGATCTCTACAAGTTCGATCCATGGGAGCTCCCAAGTAAGGCAACGTTTGGGGAGCAAGAGTGGTATTTCTTTAGCCCAAGGGATCGAAAGTACCCGAATGGGGCTCGTCCAAACAGAGCAGCTACCTCTGGCTATTGGAAAGCCACCGGAACTGATAAGCCTATCCTTGCATCCCATGGTCAACACAGAGTTGGTGTCAAGAAAGCTCTTGTTTTCTATGGTGGCAAGCCTCCTAAAGGAGTCAAAACCAATTGGATCATGCATGAGTATCGCCTCACTGATAATAATCATCATCATCATCATCTTCCTTCCACCAATAACAAGAAGAAAAATTCCTTGAGGCTTGATGATTGGGTGCTGTGCCGAATATATAAAAAAGGCAACGGTGGCAATCTTGCAAGAACAGCAGCGTTGATGATGGAGCATCATGAGAAGGATGATGATAATGATAATAAGGATCAGCTTTCAGCTGAAACAACAAGTATCATAGAAAACATGTCATCAATGGCTAATAACAACACGTGTCAGAATTCTAAGCCCACAGCCGGTTATGGACCATTGGTGATTGAAAACGTAGACAACATGTTTGATGGATTGTTAGCTGATCATAACTTGCCAATGAAAAGGCCTCTGGTGAACATGAATTGGAATGATACAACTACTAATACATCGGTAGGGTCTTGTTCTTCAAGCAAGAGGCTCCATTGTGATCTTAATAACACTAACAATAATAATACTACTGTAGCTGCTGATGAAGATAACACTTCCTTTGTTTCACTGCTTAGCCAGCTTCCTCATCATACTAGCAATAATGCTTCTCTTCTTGCCCCTGTTTCTGATGGTCTTTTCAGGCAACACTTTCAACTTCAAACCATTAATTGGAACTTCTAA 1041 0.4275 MDSTENHQHQQQPQLPPGFRFHPTDEELIVHYLKRKASSAPLPVAIIAEVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASHGQHRVGVKKALVFYGGKPPKGVKTNWIMHEYRLTDNNHHHHHLPSTNNKKKNSLRLDDWVLCRIYKKGNGGNLARTAALMMEHHEKDDDNDNKDQLSAETTSIIENMSSMANNNTCQNSKPTAGYGPLVIENVDNMFDGLLADHNLPMKRPLVNMNWNDTTTNTSVGSCSSSKRLHCDLNNTNNNNTTVAADEDNTSFVSLLSQLPHHTSNNASLLAPVSDGLFRQHFQLQTINWNF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181354g00001 346 MobiDBLite consensus disorder prediction 1 21 - -
Stsc181354g00001 346 MobiDBLite consensus disorder prediction 1 17 - -
Stsc181354g00001 346 SUPERFAMILY NAC domain 9 176 IPR036093 GO:0003677|GO:0006355
Stsc181354g00001 346 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Stsc181354g00001 346 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Stsc181354g00001 346 PANTHER NAC TRANSCRIPTION FACTOR 56 15 218 - -
Stsc181354g00001 346 FunFam NAC transcription factor 56 24 181 - -
Stsc181354g00001 346 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181354g00001 Stsc-Chr181354 1767 3301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181354g00001 13 345 NAC Transcription Factor Family AT1G61110 51.020 6.53e-100 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc181354g00001 NAM 6.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181354g00001 - - aip:107624204 493.812