Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181350g00019 ATGTTGTGCTGCGGAGGTGCAGAGGAGGAGAGCAGTGGCCCGCCTGCGAACCAAGCCACCACTGCACCGCCTAGAGGGGGAAACACATATGGTGCAGGAGGAGGAGGCAATGACAGAGGAGAGCCAAGGGGCAATGCTGCCAGGGCTGGGGCTCCACAGAAAGTGCTACCAATTGAGATTCCATCTATACCTTTGGATGAGTTAAATACGTTAACAGGAAACTTTGGTTCCAAGTCTTTCATCGGCGAAGGTTCCTACGGACGGGTCTACTATGCAAAGTTGGAAGATGGAACTGATGCTGCAATCAAGAAGCTGGATACAAGTTCTTCATATGAACCTGACACCGATTTCGCAGCTCAGTTATCAGTTGTTTCAAGATTGAAGCATGATCATTTTGTGGAGATGATTGGATACTGTCTAGAGGCAAATAACAAAATCTTGGTTTATCAATATGCAAGTCTTGGTTCTTTGCATGACATATTACACGGAAGGAAGGGTGTACAAGGGGCTGAACCAGGTCCAGTTTTAAGCTGGAATCAAAGAGCGAAAATCGCATTCGGTGCAGCAAAAGGACTTGAGTATGCAATGACTGGGCAAATAACACAGAAGAGTGACGTTTACAGTTTCGGAGTTGTGCTTTTAGAGCTCTTAACAGGAAGAAAGCCAGTAGATCACACAATGCCCAAAGGGCAGCAAAGTCTTGTAACTTGGGCAACTCCAAGGTTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGCTAAACAATGACTATCCCCCAAAGGCAATTGCTAAGGCCAAACATGACTATTGTAGTCAAAGCTCTCCAGCCACTTCTGAATGCAACAAAACCTGGTCCTGA 864 0.4618 MLCCGGAEEESSGPPANQATTAPPRGGNTYGAGGGGNDRGEPRGNAARAGAPQKVLPIEIPSIPLDELNTLTGNFGSKSFIGEGSYGRVYYAKLEDGTDAAIKKLDTSSSYEPDTDFAAQLSVVSRLKHDHFVEMIGYCLEANNKILVYQYASLGSLHDILHGRKGVQGAEPGPVLSWNQRAKIAFGAAKGLEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKAKHDYCSQSSPATSECNKTWS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181350g00019 287 Gene3D Phosphorylase Kinase; domain 1 45 151 - -
Stsc181350g00019 287 Gene3D Transferase(Phosphotransferase) domain 1 192 279 - -
Stsc181350g00019 287 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 194 - -
Stsc181350g00019 287 MobiDBLite consensus disorder prediction 1 51 - -
Stsc181350g00019 287 FunFam probable protein kinase At2g41970 48 151 - -
Stsc181350g00019 287 ProSiteProfiles Protein kinase domain profile. 75 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181350g00019 287 ProSitePatterns Protein kinases ATP-binding region signature. 81 104 IPR017441 GO:0005524
Stsc181350g00019 287 Pfam Protein tyrosine and serine/threonine kinase 80 194 IPR001245 GO:0004672|GO:0006468
Stsc181350g00019 287 SUPERFAMILY Protein kinase-like (PK-like) 55 264 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181350g00019 Stsc-Chr181350 78347 80279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181350g00019 68 266 Strubbelig Receptor Gene Family AT1G11130 34.252 1.80e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Stsc181350g00019 PK_Tyr_Ser-Thr 1.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181350g00019 - - pop:7488035 377.096