Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181349g00022 ATGGGGGGGATTGTGGCCCAGCTACAGGATCACTTTCCGGATGCTTCTTTCATGGTGTTCAACTTCCGAGAAGGGGATAGACGCAGCCAACTCTCAGATATATTTGCTCAGTATGACATGACGGTTATGGAGTACCCTCGGCAATATGAGGGTTGTCCCCTTCTGCCGTTGGAGATGATCCATCACTTCCTTAGATCAGGTGAAAGCTGGCTGCATTTGGAGGGGCAGCAAAATGTGCTTTTGATGCACTGCGAAAGGGGAGGTTGGCCCGTGTTGGCATTTATGTTAGCAGGTCTTTTATTATACCGTAAACAGTACAGCGGGGAGCAGAAAACTCTTGAGATGGTGTACAAGCAAGCTCCTAGAGAACTTCTCCACCTTTTATCTCCCTTGAACCCACAACCTTCACAATTGAGATATCTTCAGTATATTTCAAGGAGACATTTGGGTACTGAGTGGCCCCCTTCCGAAACACCCTTGTATTTGGATTGTCTGATTCTTAGAGTCCTTCCGTTGTTTGATGATGGAAAAGGTTGCAGGCCTGTGGTGCGTGTATATGGTCAAGACTCTTCAAATCCTACTAATAGAAGTTCAAAGCTTCTTTTCTCAACTTCAAAATCCAAAAAGCATGTTCGCTACTACCTGCAGGCAGAGTGTATTTTTGTGAAAATCGATATCCGTTGTCGTGTTCAAGGGGATGTTGTTCTTGAATGCATACATTTGAGTGGAGATTTCACTCGTGAGGAGATGATGTTTAGAGTCATGTTCCATACTGCATTTGTGCGGTCAAACATATTGATGTTGAGCCGTGATGAAATTGATATATTGTGGGATGCAAAAGATCAATTTTCTAGGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCCGATGCTGCTCTACCTGATCTAACCACAGTTGCAGTGAGTGATGATGCAAATGAAACTGAAAGTGCTGACACTGAAAGTGCTTCTCCTGAGGAATTTTATGAAGTGGAAGAGATTTTTAGCAATGCAATTGATGGACCTGAAGGTAAAGGTGAGTATGATTCTCATGCTATTAATGACAGTACTGTCATTGATGAAAATCATAAAGAGGTTTGGAAGGGGGAGTTGGATTCTCACAGCTTTCAGGATTGTACGCCAGATGATGGGCTAAAACGGCTTGATGAGATGGATTCTGGTATTAATGAAGTGAAAGACATCTCTGTTGATGATGTGAAATACAAGCTTGATGAGAGCATGGATTCAGATCCTCATGCAGTGAAGGACATTGCTGTCGATGATGGAGAAATTAAGTCAACCCCTGCAATCATTTCAGACATGAAAACAAAAGAAATCGATGTGGATGTGAACCAGGAAATGGTAATCCAAAACAAATATGATGAGGATAACAAAGCAATAGAGAAGGACTTAGAATCCAAGGCAGGACAACAGCCAGCTGATATTGCAAGACAAAAATCGGGTAAACTTCTTCCATCGGCTCCGAAGAAGCAACCTTCATCAAACTCAAAGCCAATGGGAGATTCCATTACAGCAAAGCAAAAGACTAAACAGCAAGAAACCCAAGGTTTTCAGTCAAAACAAGCTAAGGCCACTGCAGTAACTCAATGGATTCCTTCTAACAAGGGTTCTTATACAAACTCAATGCATGTATATTATCCATACAGGAACAATAGTGCACCTGCAGCACTTACAAATTATACAGCTCCAAAGGATAAAATGGAAGATACCAAAGTGAAGTCTTCATCTGCATCTGCTGACATGAGAAATGACCTGAAAACTCGCAAGCTGGCCCCTACAAAATCTGCAGGCAACATAGTAGTAGGAACGGATGCTAACCGCCCTCCTTCATTACCATCTGTTAAGGAAGCATCTTTTGAGTCAGCTACTGAAACAGATCAACAGAGCTCAGAACAAGAGCTACGGCCTCCACCTCCTCCTCCACCTCCACCTCCACCACCTCCACCTAGAAACTTTTCTTCACATGTTTTTGAACCCTTATCATTTCAGGATGATGTATCAAGTCAGGCCTCTCCATCTCCGCCGGTATCCTCATACTCATTGGATGGAAATGTGTCTACTGTACCACCTCCACCGCCTCCGCCTCCGCCACCACCATTTTCAAGAGCATTTACTAAATATAAAGTAGGGGTAAATTTACAACCTGCAGCTTCTCTTTCTACCCCTCCACCCCCGCCTCCACCCCCGCCCCCATTTTTTGGGCAAAATAAGGGGAGCTTCCAACCTTCTCCATCTCCATCCTCTTGGAAGTCTGTGTATTCCTCGATGTCCACCATTGGGGAATCTAGTGGTTCTGAGGTTGAAGTAGTGGGCTTTACATCTCGTCCTCCTCCACCACCTCCATCAATGCCTCCATCAAGCTATGGTGTTTCATCCATTCCTCCACCAGGACCAGCACCACCTCCTCCTCCTCCTCCTTCTTTAACATCATCATTTCCTTCTCCTTCAACAACTAGAATTCCTCCACCTCCTCCACCACCACCACTTCCTACATCTTCCGTGCATAGGAATGCACCCTCTCCACCACCACCTCCTCCTCCTCCTCCTTTTAGTCATGCTTCAACATTGCCACCTGCTCCACCGCCTCCACCTCCACCTCCTTTTAGTAGAGCTCCTCCACCGCCTCCTCCTCCATTTGGTAAAGTTCCACCACCACCACCACCACCTCCACCTCCACCTCCGTTTAGTAAAGCTCCACCACCACCTCCACCTCCACCACCTTTTAGTAGAGCACCACCACCACCACCTCCGCCTCCTTCTAGTAGAGCTCCACCTCCCCCACCGCCACCTCCTTCTAGTGGAGCTCCGCCTCCCCCGCCACCACCACCTTTCAGTAGAGCTCCGCCTCCTCCACCACCTCCTCCACGTGGAGGCCCACCTCCACCACCGCCTCCTCCATCATGTGGAGGCCCACCTCCACCGCCCCCTCCTCCAATGTCTAGAGCCCCGCCTCCCCCACCTCCCCCGATTCGTGGAGCACCACCACCTCCTCCTCCTCTTATCCGAGGAGCACCCCCTCCTCCACCACCTCCCGGGGGTAGAGGTCCACCTCCTCCGCCACTTCCTGGTAGTCGAGGCCCTCCGCCTCCACCCCTTCCTGGTGCTCCCGGTGCTCCTCCTCCTCCTAGACCTCCTGGTGGTGCACCACCACCGCCACCCTTAGGTGCAAAAGGTTCAAATGTTGGAGCTGATCCAAGAGGAAGAGGGCATGGATATGCTCGCCCTGCAGGAGCAGGTGTGGTTGCACCTCGACGGTCCTCCTTAAAGCCATTGCACTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGATTTGGAGAACCTCAAATTGGTAAATCTGGAGGGCGGCGCAAATCTGTTGGATCTAAAACTGACAAAGTCCAGTTGATTGACCTAAGGAGGGCTAATAATACTGAAATTATGCTCACGAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCCGTACTGGCTATGGATGAGTCAGTATTAGATGTAGATCAGGTGGAAAATCTCATTAAGTTTTGTCCTACCAAAGAAGAGATGGAACTTTTGAAGGGATACACGGGTGACAAAGAGAGTTTGGGAAAATGCGAACAGTATTTTTTAGAGCTGATGAAGGTGCCACGAGTAGAGTCAAAATTAAGAGTATTCTCTTTCAAGATTCAATTTCTGTCTCAGGTTACAGAATTTAAGAAGAGTTTAAATGCTGTGAACTCTGCCTGTGAAGAGGTCCGAAAGTCTGTCAAGCTGAAAGAAATCATGAAGAAAATTCTGTTTTTGGGTAATACATTGAATCAAGGAACGGCTAGGGGATCCGCAATTGGATTCAAGTTGGATAGTCTTTTAAAGCTTACTGACACTCGTGCCTCTAACAATAAGATGACACTGATGCACTATCTTTGCAAGGTTCTAGCTGAAAGGTCGCCTGGACTGCTTGACTTCCACTTAGACCTTGTAAGCCTGGAAGCTGCAACTAAGATACAATTGAAGTCCTTAGCAGAAGAGATGCAGGCAATCATCAAGGGACTAGAAAAGGTTAAACAGGAGCTTGCTGCCTCTGCAAATGATGGACCCGTGTCCGAAGTTTTCTGTAAGACATTGAAAGAATTCATATCTGTTGCTGAGTCAGAGGTAGCATCTCTGACAAACCTATATTCTGTGGTGGGTAGAAATGCAGATGCACTCGCACTATATTTTGGCGAGGATCCTGCTCGCTGTCCATTTGAACAAGTCACCACAACGCTCTTAAATTTTATAAGGTTATTTCGGAAAGCACATGAAGAGAATTGTAAGCAGGCAGAGTTAGAGAAGAAAAGAGCCGATAAAGAGGCCGAAATGGAGAAGGCTAAGGGCGTTAACTTGACGAGGAAGAGTGCAAAAGATAGTTGA 4431 0.4674 MGGIVAQLQDHFPDASFMVFNFREGDRRSQLSDIFAQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSGESWLHLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPRELLHLLSPLNPQPSQLRYLQYISRRHLGTEWPPSETPLYLDCLILRVLPLFDDGKGCRPVVRVYGQDSSNPTNRSSKLLFSTSKSKKHVRYYLQAECIFVKIDIRCRVQGDVVLECIHLSGDFTREEMMFRVMFHTAFVRSNILMLSRDEIDILWDAKDQFSRDFKAEVLFLDADAALPDLTTVAVSDDANETESADTESASPEEFYEVEEIFSNAIDGPEGKGEYDSHAINDSTVIDENHKEVWKGELDSHSFQDCTPDDGLKRLDEMDSGINEVKDISVDDVKYKLDESMDSDPHAVKDIAVDDGEIKSTPAIISDMKTKEIDVDVNQEMVIQNKYDEDNKAIEKDLESKAGQQPADIARQKSGKLLPSAPKKQPSSNSKPMGDSITAKQKTKQQETQGFQSKQAKATAVTQWIPSNKGSYTNSMHVYYPYRNNSAPAALTNYTAPKDKMEDTKVKSSSASADMRNDLKTRKLAPTKSAGNIVVGTDANRPPSLPSVKEASFESATETDQQSSEQELRPPPPPPPPPPPPPPRNFSSHVFEPLSFQDDVSSQASPSPPVSSYSLDGNVSTVPPPPPPPPPPPFSRAFTKYKVGVNLQPAASLSTPPPPPPPPPPFFGQNKGSFQPSPSPSSWKSVYSSMSTIGESSGSEVEVVGFTSRPPPPPPSMPPSSYGVSSIPPPGPAPPPPPPPSLTSSFPSPSTTRIPPPPPPPPLPTSSVHRNAPSPPPPPPPPPFSHASTLPPAPPPPPPPPFSRAPPPPPPPFGKVPPPPPPPPPPPPFSKAPPPPPPPPPFSRAPPPPPPPPSSRAPPPPPPPPSSGAPPPPPPPPFSRAPPPPPPPPRGGPPPPPPPPSCGGPPPPPPPPMSRAPPPPPPPIRGAPPPPPPLIRGAPPPPPPPGGRGPPPPPLPGSRGPPPPPLPGAPGAPPPPRPPGGAPPPPPLGAKGSNVGADPRGRGHGYARPAGAGVVAPRRSSLKPLHWSKVTRALQGSLWEELQRFGEPQIGKSGGRRKSVGSKTDKVQLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKESLGKCEQYFLELMKVPRVESKLRVFSFKIQFLSQVTEFKKSLNAVNSACEEVRKSVKLKEIMKKILFLGNTLNQGTARGSAIGFKLDSLLKLTDTRASNNKMTLMHYLCKVLAERSPGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVKQELAASANDGPVSEVFCKTLKEFISVAESEVASLTNLYSVVGRNADALALYFGEDPARCPFEQVTTTLLNFIRLFRKAHEENCKQAELEKKRADKEAEMEKAKGVNLTRKSAKDS 1476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181349g00022 1476 Gene3D Protein tyrosine phosphatase superfamily 1 161 IPR029021 -
Stsc181349g00022 1476 Gene3D Formin, FH2 domain 1093 1474 IPR042201 -
Stsc181349g00022 1476 MobiDBLite consensus disorder prediction 623 639 - -
Stsc181349g00022 1476 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 5 145 IPR029021 -
Stsc181349g00022 1476 ProSiteProfiles C2 tensin-type domain profile. 157 296 IPR014020 -
Stsc181349g00022 1476 MobiDBLite consensus disorder prediction 1450 1476 - -
Stsc181349g00022 1476 Coils Coil 1437 1466 - -
Stsc181349g00022 1476 MobiDBLite consensus disorder prediction 562 1090 - -
Stsc181349g00022 1476 MobiDBLite consensus disorder prediction 640 660 - -
Stsc181349g00022 1476 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1138 1464 - -
Stsc181349g00022 1476 MobiDBLite consensus disorder prediction 725 742 - -
Stsc181349g00022 1476 MobiDBLite consensus disorder prediction 743 776 - -
Stsc181349g00022 1476 Gene3D - 162 293 - -
Stsc181349g00022 1476 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 157 293 IPR035892 -
Stsc181349g00022 1476 MobiDBLite consensus disorder prediction 693 709 - -
Stsc181349g00022 1476 SMART PTEN_C2_2 155 295 IPR014020 -
Stsc181349g00022 1476 Coils Coil 1343 1367 - -
Stsc181349g00022 1476 MobiDBLite consensus disorder prediction 494 549 - -
Stsc181349g00022 1476 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1070 1462 IPR015425 -
Stsc181349g00022 1476 PANTHER FORMIN-J 1001 1464 - -
Stsc181349g00022 1476 MobiDBLite consensus disorder prediction 472 549 - -
Stsc181349g00022 1476 MobiDBLite consensus disorder prediction 663 692 - -
Stsc181349g00022 1476 MobiDBLite consensus disorder prediction 780 1063 - -
Stsc181349g00022 1476 SMART it6_source 564 1476 IPR015425 -
Stsc181349g00022 1476 Pfam Formin Homology 2 Domain 1091 1436 IPR015425 -
Stsc181349g00022 1476 Pfam C2 domain of PTEN tumour-suppressor protein 156 293 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181349g00022 Stsc-Chr181349 103300 111728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181349g00022 1 572 FH2 protein (formin) Gene Family AT5G07740 62.435 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181349g00022 - - gmx:100785475 996.882