Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181349g00019 ATGTCTTCACTCCACATTTCTCTTCTGCTTCTACTTCTCTTCTTGTTCCTCTTAAGCCACACCAATTGTTACTCACCTCATGTTAACTACCTCATTGATTGCGGAGCTTCCAATCAAACTCACCTCAACGATGGCAGAACCTTCAAATCCGATCGCCAAACCACTTCCCTCTTATCCACATCAGAATACATCCAAGCTTCAACCTACTCACCAATCACCATAGCCACACCACTTTCTATTCCTCCGTCATCACTTCCATTATTCCAAACCGCAAGAATCTTCAAAGAGGAATCCACATACACCTTCTACATCTCCCGAACCGGCGGTCGAATCTGGATCCGCCTTTACTTCTACGCTCTCCCTCACCCTCCCTACGATCTCACAACCGCTTCATTCTCCGTCCACACCAACCACTTCGTTCTGCTCAACAAATTCTCTCTCAGAAACAACCACGACCTTGTTTTCAAGGAGTATCTCGTCAGCGTCTTCGACAACAGATTCTCTCTCAAGTTCAAACCCAAAAAGAATTCCTTTGCATTCATCAACGCAATAGAGGTTGTCTCCGCCCCTGACACGCTCGTCTCCGACTCCGCCACCGCGGTTTCCCCTCGCGGAGAATTCAAAGGGCTAGTGCAATCTGAGTACCAAGTAATGTACCGCGTCAACGTCGGTGGCGCAATCATAGCCCCTAGCAATGACACCTTATCAAGAACATGGGAGCCTGATGATGCTTACAATGCAAATCCAAATCACTCTGTAAACGTTGCTGTTCCTTACAAAGCAATCAAATACCCTCAATTCGGTGGTGACGCACCTTTGATTGCTCCTAGCTTCGTGTACGCAACTGCAGCGCAGATCAAAGATCATAAAGACATGCAGTTTCAAAGCAAGTTCAATCTAAGTTGGATGATGAACGTGGAGAGTAGCTACTCTTACTTGATAAGGTTGCATTTCTGTGACATCGTCAGCAAAACCCTAAACCAATTGGTCTTCAATGTCTACATCAATGGCATGGTTGGTGTGCCTGATTTGAACCTTTCCTCTCAAACCAAAGACCTAGCCACAGCATTTTACCAAGACTTTGTCCTTAACGCTTCCGCGGTCGAAAACGGTTCCATCTTGGTTCAGGTTGAGCCGGCTGATCTCCACCACGGCACAAGCAACGCGATCTTGAATGGAATCGAGGTGATGAAGATGATCAACTCCGCAAACAGCTTCGACGGTTCGTTCTCCGTCGACGGACATTACCGAGGAGAACATTCGCCACACAACGAAGCAATGAGGAAGGTTGCTTTTGTTGGATTGGGTTTAGCATTTATAAACCTATTGTTGCTGTTAATAACTTGTGTTCGAATGCGAAAAGGGACTAAAACCTGGGAAGTTTCATCAAGCTTAACTTGGTGGATGATTTTTCTGTTCCATCTAAGATCATATTCAAGGAGTAATCCTCAAAGGAAAGGGTCTAAAAGATTCTTTCCTTTCAAGGAATTACAACTCGCCACGAACAACTTCGACGAAAGAAGAGTGATTGGTGTTGGAGGCTTTGGTAAAGTGTATCTTGGAAGATTAAGAGAAGACAACACAAATGTGGCCATAAAGCGAGCTAATGGCGGATCAGGACAAGGCTTAAACGAGTTCAGAACGGAGCTAGACATGCTTTCGAAGCTCCGGCATCGCCACCTTGTTTCGCTAATAGGCTACTGCGACGAGGATTCTGAAATGATTCTGGTTTATGAGTACATGGCTAATGGCTCCCTTCGGTCTCATCTCTACGGTGGTAACCGCCTCCGTCCCCTGTCTTGGCAACAGAGGCTTGAGATTTGCATCAGCGCGGCTCGCGGATTGTACTATCTCCACACCGGAGCAGCTCAGAGTGTAATTCACAGGGATGTAAAGACTACAAACATACTGTTAGATGAAAACTACGTGGCGAAGGTTTCGGATTTCGGATTGTCGAAAACACTCCCTGACAAAGCATATGTTAGCACTGCGGTGAAAGGGAGCTTTGGATATCTTGATCCTGAGTATTTCAGGAGGCTGCAATTGACACAGAAATCTGATGTGTATTCTTTTGGTGTGGTGCTTCTTGAGGCTGTTTGTGGACGGCCTGTTATATGGACTTGTCCAGTTTCAATGGAACAAGTTAGGTTGGTTGATTGGGCAATTGAACAGTGCAAAAGAGGGATGGTTCATGAGGTAGTTGATCCCTTCATTGTTGAGAGTATAAACCCTAAATCATTGAAGATGTTTTTGGGAGCTGCTAAGAAGTGTTTGGAGGATCATGGTGTTGATAGGCCTAACATGGGTGATGTGTTGTGGCATTTGGAATGTGCTTTGCAATTGCAAGAAGGTGCATCCCATGTTGATGCACCGGAATATGATATGAGTTGGAAGAATTTAGTTTGGTCTCTGCAAGAAGGGCAAAATGGGAATAGTAATGTGGTGGATAATGACACTGATCATGCAAGTAATGTGGGTGATATCACAGATGTTAATGCTGTTTTGTTTTCTCAGATAGCTAACCTTCAAGGGAGGTAA 2538 0.4515 MSSLHISLLLLLLFLFLLSHTNCYSPHVNYLIDCGASNQTHLNDGRTFKSDRQTTSLLSTSEYIQASTYSPITIATPLSIPPSSLPLFQTARIFKEESTYTFYISRTGGRIWIRLYFYALPHPPYDLTTASFSVHTNHFVLLNKFSLRNNHDLVFKEYLVSVFDNRFSLKFKPKKNSFAFINAIEVVSAPDTLVSDSATAVSPRGEFKGLVQSEYQVMYRVNVGGAIIAPSNDTLSRTWEPDDAYNANPNHSVNVAVPYKAIKYPQFGGDAPLIAPSFVYATAAQIKDHKDMQFQSKFNLSWMMNVESSYSYLIRLHFCDIVSKTLNQLVFNVYINGMVGVPDLNLSSQTKDLATAFYQDFVLNASAVENGSILVQVEPADLHHGTSNAILNGIEVMKMINSANSFDGSFSVDGHYRGEHSPHNEAMRKVAFVGLGLAFINLLLLLITCVRMRKGTKTWEVSSSLTWWMIFLFHLRSYSRSNPQRKGSKRFFPFKELQLATNNFDERRVIGVGGFGKVYLGRLREDNTNVAIKRANGGSGQGLNEFRTELDMLSKLRHRHLVSLIGYCDEDSEMILVYEYMANGSLRSHLYGGNRLRPLSWQQRLEICISAARGLYYLHTGAAQSVIHRDVKTTNILLDENYVAKVSDFGLSKTLPDKAYVSTAVKGSFGYLDPEYFRRLQLTQKSDVYSFGVVLLEAVCGRPVIWTCPVSMEQVRLVDWAIEQCKRGMVHEVVDPFIVESINPKSLKMFLGAAKKCLEDHGVDRPNMGDVLWHLECALQLQEGASHVDAPEYDMSWKNLVWSLQEGQNGNSNVVDNDTDHASNVGDITDVNAVLFSQIANLQGR 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181349g00019 845 Gene3D Transferase(Phosphotransferase) domain 1 581 796 - -
Stsc181349g00019 845 FunFam receptor-like protein kinase FERONIA 474 580 - -
Stsc181349g00019 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Stsc181349g00019 845 PANTHER OS07G0166700 PROTEIN 490 782 IPR045272 GO:0004714|GO:0006468
Stsc181349g00019 845 ProSiteProfiles Protein kinase domain profile. 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181349g00019 845 SUPERFAMILY Protein kinase-like (PK-like) 489 776 IPR011009 -
Stsc181349g00019 845 FunFam Putative receptor-like protein kinase 29 190 - -
Stsc181349g00019 845 ProSitePatterns Protein kinases ATP-binding region signature. 510 533 IPR017441 GO:0005524
Stsc181349g00019 845 SMART serkin_6 504 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181349g00019 845 FunFam Receptor-like protein kinase FERONIA 581 796 - -
Stsc181349g00019 845 CDD STKc_IRAK 510 776 - -
Stsc181349g00019 845 Gene3D - 25 190 - -
Stsc181349g00019 845 Gene3D - 213 400 - -
Stsc181349g00019 845 Gene3D Phosphorylase Kinase; domain 1 489 580 - -
Stsc181349g00019 845 Pfam Malectin-like domain 32 399 IPR024788 -
Stsc181349g00019 845 Pfam Protein tyrosine and serine/threonine kinase 507 702 IPR001245 GO:0004672|GO:0006468
Stsc181349g00019 845 FunFam Receptor-like protein kinase FERONIA 214 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181349g00019 Stsc-Chr181349 88906 91443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181349g00019 17 812 Receptor kinase-like Gene Family AT5G61350 52.593 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc181349g00019 Malectin_like 7.2e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181349g00019 - - gmx:100814982 987.252