Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181348g00022 ATGGCAGAACCTGCATATATAGTGGCATCTGACAGCGAGACCACGGGAGAGGATAAGACATCTACTTTACCCGAAATAGCAATTGGAATTGACATTGGCACATCACAATGCAGTATTGCTGTTTGGAATGGTTCCCGAGTCGAGCTTTTGAAGAACACCAGGAACCAGAAGTTGATGAGATCATATGTCACCTTCAAAGATGACATCCCTTCCGGTGGAGTCACCAGCCAACTCTCCCATGAGGCTGACTTGTTTTCCGGAGCCACAGTCTTCAACATGAAGCGTTTGATTGGCAGAGTTGACACTGACCCTGTTGTCCATGCAAGCAAGAGTCTCCCATTTCTGGTGCAGACATTGGACATTGGTGTTCGCCCTTTTATTGCTGCATTGGTGAACAATATGTGGAGATCCACCACTCCTGAAGAAGTGCTGGCAATATTCCTGGTGGAATTGAGAGCACTGGCTGAAGCTCAGCTGAAAAGGCCTATAAGGAATGTAGTCCTCACAATTCCTGTTTCGTTCAGTCGCTTTCAGCTTACCCGAATCGAGCGTGCTTGCGCAATGGCTGGCCTTCATGTGCTTAGGTTGATGCCGGAACCCACAGCCGTCGCTTTGCTATATGCGCAGCAGCAACAGCAGGGTTCTCATGAGAATATGGGCAGTGGAAGTGAGAAAATTGCTCTCATTTTCAACATGGGTGCTGGTTATTGTGATGTTGCTGTCACAGCTACTGCTGGAGGAGTTTCTCAGATAAAAGCCTTGGCTGGAAGTACCATAGGTGGGGAAGACTTGCTTCAAAATATGATGCGTCATCTCTTGCCTGATTCTGAGAATATATTCAAGAGCCATGGGCTCAAAGATATTGAATCAATGGCATTGCTTCGGGTTGCAACGCAGAACGCGATTCACCGGCTTTCCTCGGACACCAATGTCCAGGTTGATGTAGACTTGGGGAATGGGGTGAAGATAAGCAAGGTTGTTGACAGGGAGGAGTTTGAGGAAGTGAATAGGAGTGTGTTCGAGAAGTGCGAAAGCCTAATCATTCAGTGTTTGCAGGATGCAAGAGTAGAGGTTGAGGATCTAAATGATGTGATCATGGTTGGTGGATGTTCTTATATCCCAATGGTGAAGAATCTAGTTACTAACATATGTAAGGTAAAGGAACTTTACAAAGGTATGAATCCTTTAGAGGCTGCAGTTTGCGGCGCAGCGGTGGAAGGAGCTGTTGCTTCAGGCATCAATGATCCCTTTGGGAACTTGGACTTGTTAACCATTCAGGCCACACCTATGGCAATCGGTATTCGAGCCGATGGAAACAACTTTATCCCTGTAATTCCCAGGAATACCACAATGCCTGCACGGAAGGAGCTGATTTTCACAACGGTTCATGACAATCAAACTGAGGCATTGATCCTTGTGTATGAAGGTGAGGGGAAGAAGGCAGAGGAGAATCACTTGTTGGGATATTTCAAGATAATGGGAATACCGGCAGCGCCGAAAGGAGTGCCTGAAATCAATGTGTGCATGGACATAGATGCAGCCAATGTGCTGCGAGTTTTAGCCGGTGTGGTGATGCCTGGATCTCGCCAACCTGCAATTCCTGTTATGGAAGTGAGGATGCCGACGGTGGAAGATGGGCATGGTTGGTGTGCTGAGGCCCTGAATAGAAACTATGGCGCTACATTGGATTTGGTTACTATTCATCAGAAGGCATAA 1716 0.4709 MAEPAYIVASDSETTGEDKTSTLPEIAIGIDIGTSQCSIAVWNGSRVELLKNTRNQKLMRSYVTFKDDIPSGGVTSQLSHEADLFSGATVFNMKRLIGRVDTDPVVHASKSLPFLVQTLDIGVRPFIAALVNNMWRSTTPEEVLAIFLVELRALAEAQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQGSHENMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMRHLLPDSENIFKSHGLKDIESMALLRVATQNAIHRLSSDTNVQVDVDLGNGVKISKVVDREEFEEVNRSVFEKCESLIIQCLQDARVEVEDLNDVIMVGGCSYIPMVKNLVTNICKVKELYKGMNPLEAAVCGAAVEGAVASGINDPFGNLDLLTIQATPMAIGIRADGNNFIPVIPRNTTMPARKELIFTTVHDNQTEALILVYEGEGKKAEENHLLGYFKIMGIPAAPKGVPEINVCMDIDAANVLRVLAGVVMPGSRQPAIPVMEVRMPTVEDGHGWCAEALNRNYGATLDLVTIHQKA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181348g00022 571 SUPERFAMILY Actin-like ATPase domain 26 209 IPR043129 -
Stsc181348g00022 571 FunFam Heat shock 70 kDa protein 8 91 146 - -
Stsc181348g00022 571 PRINTS 70kDa heat shock protein signature 421 440 - -
Stsc181348g00022 571 PRINTS 70kDa heat shock protein signature 502 518 - -
Stsc181348g00022 571 PRINTS 70kDa heat shock protein signature 166 186 - -
Stsc181348g00022 571 PRINTS 70kDa heat shock protein signature 26 39 - -
Stsc181348g00022 571 PRINTS 70kDa heat shock protein signature 54 66 - -
Stsc181348g00022 571 PRINTS 70kDa heat shock protein signature 393 413 - -
Stsc181348g00022 571 PRINTS 70kDa heat shock protein signature 361 377 - -
Stsc181348g00022 571 FunFam Heat shock 70 kDa protein 8 261 342 - -
Stsc181348g00022 571 Gene3D - 212 390 - -
Stsc181348g00022 571 Gene3D - 28 408 - -
Stsc181348g00022 571 FunFam Heat shock 70 kDa protein 8 416 531 - -
Stsc181348g00022 571 Gene3D - 91 146 - -
Stsc181348g00022 571 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 423 529 IPR029047 -
Stsc181348g00022 571 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 418 534 IPR029047 -
Stsc181348g00022 571 Gene3D Actin; Chain A, domain 4 261 342 - -
Stsc181348g00022 571 SUPERFAMILY Actin-like ATPase domain 224 409 IPR043129 -
Stsc181348g00022 571 PANTHER HEAT SHOCK PROTEIN 70KDA 27 521 IPR013126 GO:0005524|GO:0140662
Stsc181348g00022 571 CDD HSP70_NBD 28 408 - -
Stsc181348g00022 571 Pfam Hsp70 protein 27 522 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181348g00022 Stsc-Chr181348 107288 109939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181348g00022 27 521 Calmodulin-binding Proteins AT3G12580 38.416 5.84e-105 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181348g00022 K09489 - gmx:100809773 1008.44