Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181348g00017 ATGGAAAACTACAACAACAACAACAACTCAGCAGCAATTTGCTTGCGTCCATTTAAGGTATCCGATGCGGATGACTTGCTTACATGGGGAAGCGATGATAGAGTCACGCGCTTCTTGAGATGGAACTCCATCACATCCAAACAAGAAGCCATCAATTACATAAACAAGGTTGCCGTCACTCATCCATGGCGCCGATCTATATGCCTCCATGACCGCTCCATCGGATACGTTTCGGTCAGGCCTGAATCGGGCGATTACCGGTGCAAGGCTCATGTGAGCTACGCGGTGGCGGCTCAGCACTGGGGGAAAGGGATAGCCACGGCGGCTCTGAGGATGGCCATACCGGAAGCTTTGAAAGAGTTTCCGGAGGTGGTGAGAGTGGAGGCGTTGGTGGAGGTTGACAATATGGCCTCTCAAAGGGTTCTCCTCAAACTTGGCTTTCACAAAGAGGGTTTGCTACGTAAATATGCCTTCTGTAAAGGGCACATCAGGGATTTCCTTATGTATAGCTTCTTTCCTACGGATACGGATACACATACGAATACATATCTACTTGAACAATTGGCTCCTTCTTCAACTTGTAGGAGGAGGTCTTGCTTTGCTAGCAGGCAGCAATTATAG 621 0.4879 MENYNNNNNSAAICLRPFKVSDADDLLTWGSDDRVTRFLRWNSITSKQEAINYINKVAVTHPWRRSICLHDRSIGYVSVRPESGDYRCKAHVSYAVAAQHWGKGIATAALRMAIPEALKEFPEVVRVEALVEVDNMASQRVLLKLGFHKEGLLRKYAFCKGHIRDFLMYSFFPTDTDTHTNTYLLEQLAPSSTCRRRSCFASRQQL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181348g00017 206 Pfam Acetyltransferase (GNAT) domain 13 148 IPR000182 GO:0016747
Stsc181348g00017 206 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 13 173 IPR000182 GO:0016747
Stsc181348g00017 206 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 175 - -
Stsc181348g00017 206 Gene3D - 8 187 - -
Stsc181348g00017 206 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 13 171 IPR016181 -
Stsc181348g00017 206 CDD NAT_SF 74 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181348g00017 Stsc-Chr181348 83968 85101 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc181348g00017 Acetyltransf_3 3.4e-22 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181348g00017 - - jre:109005795 249.595