Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181348g00016 ATGGCTTCTTACCTTGTTCTAATAACACAATTTGTTTCCACTGTTATCATTGTTCTGATATCCCTTAAGCTTAAACCAACAGAGTCACAGAAACTAAATAATCCAAGACTGGTGAAAGCTCAAGCAGCACTTGAAGCATGGACACATTCCATAACCTCTGACCCAAACAAAATCACTTCCACATGGTCTGGCCCCAATGTGTGCAACTACACTGGCATCTACTGTGCACCAGCTCCAGATGACTCCACCGTGTTCACAGTGGCTGGAATTGACCTTAAGGATGCAAACATAGCCGGTTCATTACCGGAAGATCTTGGCCTCTTAACCGACCTAGACTTCTTCCATATAAACTCCAACAGATTCACCGGTTCCCTCCCTAACAGTTTTAACAAACTTTCCCTTCTTTATGAGCTTGATATCAGTTTCAACCAATTCTCAGGACCCTTTCCACAAGTTGTTCTTGCCATTCCTTCACTCAGATACTTGGACATTAGGTTCAACAACTTCGCCGGCGACATTCCTTCGCGCCTTTTCGACCTCAAACTCGACGCTCTCTTCATCAACAATAACAGATTCCAATTCACCTTACCTCAAAACTTTGGGAACTCGCCCGTTTCTGTTATGGTGTTATCAAACAATGATATTAAGGGTCGTATTCCATCAAGTGTTGGCAAAATGAAGGACACCCTTAATGAGATTATAATATCGAATACAGGGTTAACGGGTCCATTGCCCCAAGAAATAGGGTACTTAGAGAAAGTGACAGTGTTTGATGTGAGCTTCAACAGATTGGAGGGAGAGCTACCAGGAAGTATGCAAGGAATGAAGAGCTTGGAGCAGTTGAATTTAAAGGATAACAATTTTTCAGGTGTGGTTCCAAGCAGTATATGTACGTTGCCTAAGTTGGAGCATTTTGATGGTTCAGATAATGACTTCCATGGCCCATTGCCCAAATGTCCCTTCATTCAACCAAACCATAATCGGGGAAAATTTATGATCTTCTAA 1005 0.4229 MASYLVLITQFVSTVIIVLISLKLKPTESQKLNNPRLVKAQAALEAWTHSITSDPNKITSTWSGPNVCNYTGIYCAPAPDDSTVFTVAGIDLKDANIAGSLPEDLGLLTDLDFFHINSNRFTGSLPNSFNKLSLLYELDISFNQFSGPFPQVVLAIPSLRYLDIRFNNFAGDIPSRLFDLKLDALFINNNRFQFTLPQNFGNSPVSVMVLSNNDIKGRIPSSVGKMKDTLNEIIISNTGLTGPLPQEIGYLEKVTVFDVSFNRLEGELPGSMQGMKSLEQLNLKDNNFSGVVPSSICTLPKLEHFDGSDNDFHGPLPKCPFIQPNHNRGKFMIF 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181348g00016 334 Gene3D Ribonuclease Inhibitor 38 204 IPR032675 -
Stsc181348g00016 334 FunFam Leucine-rich repeat extensin-like protein 1 41 202 - -
Stsc181348g00016 334 Gene3D Ribonuclease Inhibitor 205 327 IPR032675 -
Stsc181348g00016 334 SUPERFAMILY L domain-like 49 321 - -
Stsc181348g00016 334 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 203 291 - -
Stsc181348g00016 334 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 27 321 - -
Stsc181348g00016 334 Pfam Leucine rich repeat 253 311 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181348g00016 Stsc-Chr181348 75269 76273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181348g00016 32 328 Leucine-rich Repeat extension Gene Families AT3G22800 61.409 2.45e-124 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181348g00016 - - adu:107488511 557.37